Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1 206 5e-48 seq4 156 8e-33 seq3 150 3e-31 >seq1 Length=4909981 Score = 206 bits (228), Expect = 5e-48 Identities = 176/217 (81%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| |||||||||||||| || || || | || || ||||| Sbjct 2135912 CAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATC 2135971 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| |||||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 2135972 TTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 2136031 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 2136032 TTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 2136091 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||| || || | |||||||||||| || ||||||||| Sbjct 2136092 TTTACCAGTTAAGGTCTTGACGAAAATTTGCATTATG 2136128 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | ||||| |||||||| ||||| || || || | || || ||||| Sbjct 2135684 CAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATC 2135743 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| |||||||| ||||||||||| Sbjct 2135744 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 2135803 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | |||||| || || ||||| | ||||| |||||||| |||||||| Sbjct 2135804 TTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 2135863 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | ||||||||| || || ||||| Sbjct 2135864 TTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 >seq4 Length=2685930 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || | || || ||||||||||| || || || || || || || ||||| Sbjct 2594963 CAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATC 2595022 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 2595023 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 2595082 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||||||| | ||||| || |||||||| | ||||| ||||||||||| ||||| Sbjct 2595083 TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 2595142 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 ||| || || | || || ||||| Sbjct 2595143 TTTACCAGTCAAAGTTTTAACGAA 2595166 >seq3 Length=2682731 Score = 150 bits (166), Expect = 3e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| | ||||| || ||||||||||| || || || | || || ||||| Sbjct 829595 CAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATC 829654 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | ||||||||| || |||||||| ||||| ||||| Sbjct 829655 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTC 829714 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||||| || || ||||| | ||||| ||||| | ||| ||||| Sbjct 829715 TTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGT 829774 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| | ||| || ||||| || ||||| Sbjct 829775 CTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 829807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622319358040