Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 145 9e-30 seq1 87.8 2e-12 >seq2 Length=4155432 Score = 145 bits (160), Expect = 9e-30 Identities = 776/1221 (64%), Gaps = 33/1221 (3%) Strand=Plus/Minus Query 114124 ACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTC 114183 |||||| || ||||| || || | | || || || | || ||||| | || || || Sbjct 221051 ACCTTGAGAAGCTGGAGAACCTTGGTAAGTTTCATAAGTACCTTCAACAGCAGCTAACTC 220992 Query 114184 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 114243 | | ||||| | || || ||||| || || |||||||| ||||||||| | ||| Sbjct 220991 AGTGGAAGCCTCAATAGCAGCATGATAAATAGTTTCAAAAATTTGAGCATTCAATTGCTT 220932 Query 114244 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 114303 ||||| || ||||| | | || ||| || || ||||| || | ||||||||| Sbjct 220931 AGCCTCTGGAGATTCAAATGGCAATCTCAACATCATGAAAACATCAGCCAAACCTTGGAC 220872 Query 114304 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAA 114362 ||| | |||| || | ||||||| ||||| ||| ||| ||| || ||||| | Sbjct 220871 ACCAACAGCAATAGGTCTGTGTCTCAAGTTAGATCTTCTAGC-TTCTGGGACTGGATAGA 220813 Query 114363 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 114422 | || || || |||| | | || | || ||||| ||||| || | ||| ||||| | || Sbjct 220812 AGTTTCTGTCAATAATCTTGTTCAAGTTCTTGGTCACAACTTTAGAGATATCATGCAACT 220753 Query 114423 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA---------GGAAGGGCGA 114473 | || | | | || | || ||||||| |||| | | || | || | Sbjct 220752 TATCAAAGTTATAAGTAGCAGATTCTTCAT---CATATTCAACGAAAGCTGGTAATGCAA 220696 Query 114474 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 114533 || |||| ||||| |||| || |||| | ||| | || || | |||||| || Sbjct 220695 CAGAAGCCAAGTTACAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCACAAC 220636 Query 114534 ACAAATTTGAACTCTTAATGGTGCCCAAG-TTCTTTTGATTTGACTTTGTGTTACACGCA 114592 |||| || ||| || || | ||||| |||||||| || || || | ||||| ||| Sbjct 220635 ACAAGTTGGAAGATTTGAT-AAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAGCA 220577 Query 114593 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAG 114652 || || || | |||| |||| || || || || ||||| | | | ||| | ||| Sbjct 220576 TCTTTATACAACATGAATGGAGTACCAGTTTCAGTTTGAGCTTCCAAAATGCTGTACCAC 220517 Query 114653 ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGG 114712 | | ||| || || | ||| || || || || || || ||| Sbjct 220516 AACTTTTGGGCCTTAACGGTTCTTCTACCTCTGCCTTCTCTTTCATATTTCTCATAAAGG 220457 Query 114713 GCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGA 114772 ||||| || |||||||| | || | | ||| || | || ||| | || | Sbjct 220456 GCTTCGAATTCTTCACCATAAGTGTCAGCCAAACCTTCAGCTTCATTAGGGGAAAACAAG 220397 Query 114773 GACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAG 114832 | ||| | || ||||| | |||||| || | ||| | |||||| | ||||| | Sbjct 220396 GTCCAGTCTTGGTTCTTTTCAACTCTCTTCATAAATAAGTCGGAGATCCATAAAGCTGGG 220337 Query 114833 AAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 114891 || | ||| | | | || |||||| | || ||||| | | || | || || Sbjct 220336 AATAAATCTCTGGCCCTGA-TTTCTTCTTTACCATGATTCTTTCTGATATCAATGAAATC 220278 Query 114892 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGAC 114947 | |||||| | |||||| ||||| | || | || | | ||| ||| | || Sbjct 220277 AAAGATATCTGAGTGCCATGGTTCAACATATATGGCAAAGGCACCAGGTCTTTTG-TTAC 220219 Query 114948 CAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCAT 115007 || | || | ||||| || || ||| || || || | | ||||||||| ||||||| Sbjct 220218 CACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCTCAACATTGGAATAATACCAT 220159 Query 115008 CAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCA 115067 ||| ||||| || || |||| ||| | | | ||| | || | |||||||| Sbjct 220158 TAGAGGTACCATTAGTACCAGCAATATAAGAACCAGTAGATCTAATATTGTTGATGTGCA 220099 Query 115068 TACCAATACCCCCTGCCCACTT--TGAGATTTGCGCGCA-CTCCGTGAGACTGCCGTAGA 115124 ||||||||| || || || ||| | | || || | | | | | | | | Sbjct 220098 AACCAATACCGCCAGCGTGTTTACTGATAATGGC---CATTTGTTTCAAAGTTTCAAAAA 220042 Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT- 115183 | || || || |||||| ||| | || | |||||| || |||||||| ||| || Sbjct 220041 TACCATCAATGGAGTCATTCTTCATGGCCACAAGGAAACAAGAAGACATTTG-GGCATTA 219983 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTT 115242 || ||||||||||| || | ||||| | || || |||| ||| | | |||||| Sbjct 219982 GGAGTACCAGCGTTAAACAATGTTGGAGAAGCATGAGTGAA-ATATTTGAGAGACATCAA 219924 Query 115243 ATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 || ||| || ||||| || ||||| ||||| ||||| ||||| || | || | ||| Sbjct 219923 ATTGTAAGTTTCCAACACTTTTGGAATATCTTCACCGTGGATACCAATAGCAACTCTCAT 219864 Query 115303 AAACATGTATTGGGGTGTTTC 115323 | || || ||| ||| |||| Sbjct 219863 GACCAAGTGTTGTGGTCTTTC 219843 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/148 (73%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 172811 GGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTC 172870 ||||| ||||| |||| ||| | |||||| | ||||||||||| || | | ||| Sbjct 3400417 GGGAAAACACCATAGTAATCTCTACCAACAATTTTTAGACCAGCAACAGCTAAAGACTTA 3400476 Query 172871 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTG 172930 ||||| ||||| || |||| || || ||||||||| | || | || || || ||| Sbjct 3400477 GCGGAGTCACCTTCTGTCAAAATAAGAGTACACTTTTCGCTTTCTCTGGTTCCTGCTTTG 3400536 Query 172931 TTCGCATCGTCCAAC-TTGGGAATACCA 172957 |||||||| ||||| ||||| ||||| Sbjct 3400537 TTCGCATCCACCAACTTTGGGTGTACCA 3400564 >seq1 Length=4909981 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| ||| ||| | ||| || || | ||| || ||||| || ||||| || || Sbjct 4056455 GGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCC 4056396 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||| | ||||| ||| ||||||||||| || | | ||| ||||| |||||||| || Sbjct 4056395 TGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAAT 4056336 Query 126166 TCCCTCCACACACGCGAACGCAA 126188 || || ||| || || |||| Sbjct 4056335 ACCTTCAACAGCAGCAAAGGCAA 4056313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353547731560