Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=4909981 Score = 114 bits (126), Expect = 1e-20 Identities = 169/237 (71%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 ||||| | ||| ||||| || | ||| ||||||||||||||| || |||||||| ||| Sbjct 2135661 ATTTAGCAACCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTG 2135720 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 || |||| || || | | || || | ||||||||||| || || | || || ||| Sbjct 2135721 TAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGG 2135780 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCT 42151 || | ||| | | ||||||| | ||| | || | |||| | | | ||||| Sbjct 2135781 TCTGGTGGAATACCTTCCTTGT-CTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGA 2135839 Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || | ||||||||||| || |||| ||||| |||||||||||||| Sbjct 2135840 AGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| || | ||| ||||| ||||||||| || ||||| || ||||| |||| Sbjct 2135897 ACCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGA 2135956 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || | | || || | |||||||||||| || || | || || ||||| | ||| Sbjct 2135957 CAAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2136016 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159 | | ||||||| | ||| | || | |||| | | | ||||| ||||| | Sbjct 2136017 AATACCTTCCTTGT-CTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 2136075 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 | || | ||||||||||| || |||| ||||| || || ||||||||| Sbjct 2136076 CTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212752468880