Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 129 7e-25
seq1 86.0 8e-12
>seq2
Length=4155432
Score = 129 bits (142), Expect = 7e-25
Identities = 342/518 (66%), Gaps = 16/518 (3%)
Strand=Plus/Minus
Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 116144
|||||| || ||||| || || | | || ||||| | || ||||| | || || ||
Sbjct 221051 ACCTTGAGAAGCTGGAGAACCTTGGTAAGTTTCATAAGTACCTTCAACAGCAGCTAACTC 220992
Query 116145 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 116204
| | ||||| | || || ||||| || || |||||||| ||||||||| | |||
Sbjct 220991 AGTGGAAGCCTCAATAGCAGCATGATAAATAGTTTCAAAAATTTGAGCATTCAATTGCTT 220932
Query 116205 GGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGAC 116264
||||| || ||||| | | | ||| || || ||||| || | |||||||||
Sbjct 220931 AGCCTCTGGAGATTCAAATGGCAATCTCAACATCATGAAAACATCAGCCAAACCTTGGAC 220872
Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT-CCACGGGATAAA 116323
||| | |||| || | ||||||| ||||| ||| ||| ||| || ||||| |
Sbjct 220871 ACCAACAGCAATAGGTCTGTGTCTCAAGTTAGATCTTCTAGC-TTCTGGGACTGGATAGA 220813
Query 116324 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 116383
| || || || |||| | | || | || ||||| ||||| || | ||| ||||| | ||
Sbjct 220812 AGTTTCTGTCAATAATCTTGTTCAAGTTCTTGGTCACAACTTTAGAGATATCATGCAACT 220753
Query 116384 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA---------GGAAGGGCGA 116434
| || | | | || | || ||||||| |||| | | || | || |
Sbjct 220752 TATCAAAGTTATAAGTAGCAGATTCTTCAT---CATATTCAACGAAAGCTGGTAATGCAA 220696
Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494
|| |||| ||||| |||| || |||| | ||| | || || | |||||| ||
Sbjct 220695 CAGAAGCCAAGTTACAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCACAAC 220636
Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAG-TTCTTTTGATTTGACTTTGTGTTACACGCA 116553
|||| || ||| || || | ||||| |||||||| || || || | ||||| |||
Sbjct 220635 ACAAGTTGGAAGATTTGAT-AAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAGCA 220577
Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591
|| || || | ||| |||| || || || || |||||
Sbjct 220576 TCTTTATACAACATGAATGGAGTACCAGTTTCAGTTTG 220539
Score = 84.2 bits (92), Expect = 3e-11
Identities = 108/148 (73%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 176831 GGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTC 176890
||||| ||||| |||| ||| | |||||| | ||||||||||| || | | |||
Sbjct 3400417 GGGAAAACACCATAGTAATCTCTACCAACAATTTTTAGACCAGCAACAGCTAAAGACTTA 3400476
Query 176891 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTG 176950
||||| ||||| || |||| || || ||||||||| | || | || || || |||
Sbjct 3400477 GCGGAGTCACCTTCTGTCAAAATAAGAGTACACTTTTCGCTTTCTCTGGTTCCTGCTTTG 3400536
Query 176951 TTCGCATCGTCCAAC-TTGGGAATACCA 176977
|||||||| ||||| ||||| |||||
Sbjct 3400537 TTCGCATCCACCAACTTTGGGTGTACCA 3400564
>seq1
Length=4909981
Score = 86.0 bits (94), Expect = 8e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| ||| ||| | ||| || || | ||| || ||||| || ||||| || |||
Sbjct 4056454 GCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCCT 4056395
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| | ||||| ||| ||||||||||| || | | ||| || ||||||||||| ||
Sbjct 4056394 GGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAATA 4056335
Query 127640 CCCTCCACACACGCGAACGCAA 127661
|| || ||| || || ||||
Sbjct 4056334 CCTTCAACAGCAGCAAAGGCAA 4056313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507146318120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |