Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3 100 7e-16 seq1 100 7e-16 >seq3 Length=2682731 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| | || || |||||||||| ||||||||||| |||||| || || Sbjct 829592 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 829651 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || || || || ||||| | | || || || || ||| |||||| Sbjct 829652 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTT 829711 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| || || || | ||||| | | ||| || || | || || Sbjct 829712 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAAT 829771 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| | ||||| || |||||||| Sbjct 829772 GGTCTTACCCGTTAAGGTTTTAACGAAAATTTG 829804 >seq1 Length=4909981 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | ||| | || || || ||||||| ||||||||||| ||| || || || Sbjct 2135909 TCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 2135968 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| |||||| || || || || | | || ||||| || ||| ||||| Sbjct 2135969 ATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 2136028 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || |||||||| ||| || || | ||||| | | ||| || ||||| ||||| Sbjct 2136029 GTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 2136088 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || | || || || |||||||| Sbjct 2136089 GGTTTTACCAGTTAAGGTCTTGACGAAAATTTG 2136121 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || || ||||| | ||||||||||| ||| || || |||||||||| ||||| || Sbjct 2135700 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCA 2135759 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 || || || | | || ||||| || ||| ||||| || |||||||| ||| Sbjct 2135760 GCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 2135819 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 || || | ||||| | | ||| || ||||| ||||| || ||||| || | || Sbjct 2135820 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTC 2135879 Query 199613 TTCACAAAAATTTG 199626 || ||||| ||||| Sbjct 2135880 TTGACAAAGATTTG 2135893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921494265469