Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4 172 1e-37 seq1 163 6e-35 seq3 158 3e-33 >seq4 Length=2685930 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | || | ||| || |||||||| |||||||| || | ||| || Sbjct 2594954 TCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGT 2595013 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || ||||||||| || ||||| || Sbjct 2595014 TCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 2595073 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| || ||||| || ||||||||||| ||| ||| ||||| | Sbjct 2595074 TTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 2595133 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 ||||| || || || ||||||||||| ||||| Sbjct 2595134 GGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2595166 >seq1 Length=4909981 Score = 163 bits (180), Expect = 6e-35 Identities = 172/224 (77%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAG 194977 ||| | ||||||||| | ||| | ||||| |||||||| || ||||| || | |||| | Sbjct 2135903 TCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAG-G 2135961 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | ||||||||| || || || | || |||||||||||| ||||| | Sbjct 2135962 TTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATAC 2136021 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| || |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 2136022 CTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 2136081 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | || || || || || || || ||||| | ||||||| Sbjct 2136082 AAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 Score = 152 bits (168), Expect = 1e-31 Identities = 169/223 (76%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAG 194977 ||| | ||||||||| | || | ||||| ||||||||||| ||||| || | |||| | Sbjct 2135675 TCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-G 2135733 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | |||||||| || || || | || |||||||||||| ||||| | Sbjct 2135734 TTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATAC 2135793 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 |||| ||||||||||| || |||||| || ||||| ||||| ||| ||| ||||| | Sbjct 2135794 CTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCA 2135853 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || || || || || || | |||||| Sbjct 2135854 AAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 >seq3 Length=2682731 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||| | ||||| || ||||| || ||||| || | | ||| Sbjct 829586 TCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGT 829645 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| || ||||| | || |||||| || || ||||| || Sbjct 829646 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACC 829705 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| || || ||||| || ||||| ||||| || ||| |||||||| Sbjct 829706 TTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAG 829765 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || || ||||| ||||| | |||||| Sbjct 829766 GGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 829807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481500493369