Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 seq1 91.5 1e-13 >seq4 Length=2685930 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| | || |||||||| |||||||| ||||| || ||| | || Sbjct 2594963 CAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATC 2595022 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || ||||| || | |||| || || ||||| Sbjct 2595023 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 2595082 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| ||| ||| | | | || || | || || |||| ||||| || Sbjct 2595083 TTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGT 2595142 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAA 48758 ||| || ||||||||||| || ||| Sbjct 2595143 TTTACCAGTCAAAGTTTTAACGAAA 2595167 >seq1 Length=4909981 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| | ||| ||||||||||| ||||| ||||| | ||| | || Sbjct 2135684 CAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATC 2135743 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| |||||||| ||||| |||| || ||||| || | |||| || |||||||| Sbjct 2135744 TTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 2135803 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || ||| | | || || || | || || |||| || || || Sbjct 2135804 TTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 2135863 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || || || || ||||| || ||||| Sbjct 2135864 TTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || | ||| |||||||| || ||||| ||||| | ||| | || Sbjct 2135912 CAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATC 2135971 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||||||||| ||||| |||| || ||||| || | |||| || |||||||| Sbjct 2135972 TTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTC 2136031 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || ||| | | || || || | || || |||| || || || Sbjct 2136032 TTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 2136091 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || || || || || || ||||| ||||| Sbjct 2136092 TTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 2136124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937567501261