Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 >seq1 Length=4909981 Score = 118 bits (130), Expect = 2e-21 Identities = 544/852 (64%), Gaps = 21/852 (2%) Strand=Plus/Minus Query 47852 ACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAG 47911 ||||| || ||||||||||| ||||| || | || ||||| || |||||||| || Sbjct 4056733 ACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAATGAGATATTTTCCATGAAATCAAAT 4056674 Query 47912 GGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCAGGTGATCCGCGA 47969 || ||| ||| |||||| | ||| | |||| ||| || || || | Sbjct 4056673 GGATTGTTAACGTTGTACACCTTCTTGTTA--CCCAATGACACCAACAATCTGTCAGCAA 4056616 Query 47970 CGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAG 48029 || |||| | |||| |||| | ||| ||||| || | | || || ||||| | Sbjct 4056615 CGAACTCTACATATTGGCACATTAATGTGCAATTCATACCCAACAATGAAACTGGCAAGG 4056556 Query 48030 CCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGG 48089 | | |||| | |||| || || || | || ||||| | ||||| | ||| Sbjct 4056555 CATCAGTGAAATACTCTTTTTCAATATCAACTGCTTCAGTGATAATCTTTTCAACAATT- 4056497 Query 48090 ACTCTGAGGGT---TTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGT 48146 |||| ||| ||||| || || || | | | || ||||||||||| ||| Sbjct 4056496 --TCTGCAGGTGGCTTGTTTTCCAAATG---GGAAAACAACAAACAGGCAAAGTCTGTGT 4056442 Query 48147 GCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCC 48206 |||| ||||| || | | || || |||||||||| | || ||||| | |||| Sbjct 4056441 GCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCCTGGCATCAAACCCC 4056382 Query 48207 TCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCG 48266 ||| ||| | |||||| || | || ||||| ||||||||||| || || || || || | Sbjct 4056381 TCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAATACCTTCAACAGCAG 4056322 Query 48267 CGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCC 48326 | || || | || || || || |||| | | || |||||| | |||| Sbjct 4056321 CAAAGGCAACCAATCTTTCACCAAATAAAGCCTCATCATCGTTGATCCATCTCAAAGCCC 4056262 Query 48327 AGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACT 48386 |||| | ||| | ||| || ||||| || || || ||||| ||| | | | | Sbjct 4056261 AGTC-GGCTTTTGCTTTATACATGGGATAGTTTCAATGGCATTGAATAAAAATTCAGATT 4056203 Query 48387 CACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCT 48446 | || |||| | || ||| | ||| | ||| | |||||||| | ||| | Sbjct 4056202 CTTTTGGGTCCTTGATGTAAGTATCAATTAGCAAAGAGTAAGTTTCAGAGTGAATATTTT 4056143 Query 48447 CTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC-AAACACCTGCACTTCTGTGGAG 48505 | || || ||||| || || ||| |||| || ||| |||||||| | ||| Sbjct 4056142 CCATCATAATTTGGAAACCATAAAAGAATTTGGCTTCTGGACA-TTGCACTTCGGCAGAG 4056084 Query 48506 AATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACA 48565 || | || | || || |||||||| || ||||| |||||||||||| || | || Sbjct 4056083 AAGTTTTCAACCAAGTTTTCATTGACAATACCATCACTAGCAGCAAAGAAAGCCAACAC- 4056025 Query 48566 TGTTTA-AGGAAATGGCGCTCGTTGTGGGTGA---GAGCATTCCAGCCCTGTACGTCTTT 48621 | | | ||||||| | |||||| | | |||||||| | || | ||||| Sbjct 4056024 TCTAGAGAGGAAATATCTTTCGTTGGCATTCAACTTGTCATTCCAGTCATGCATATCTTT 4055965 Query 48622 GCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCA 48681 | || ||| | ||||| |||||||||| || || || || |||||||| ||| Sbjct 4055964 ACTCAAGTCGATCTCTTCAGCAGTCCAGAATGAAGCTTCAGCCTTCTTGTACATTTGCCA 4055905 Query 48682 TATGTCCGGATA 48693 ||| || |||| Sbjct 4055904 TATTTCATGATA 4055893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532718490880