Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 199 2e-46 >seq2 Length=4155432 Score = 199 bits (220), Expect = 2e-46 Identities = 455/674 (68%), Gaps = 23/674 (3%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 |||||| ||| ||||||||| || | ||||| | || ||||||||||| || || Sbjct 220378 TCAACTCTCTTCATAAATAAGTCGGAGATCCATAAAGCTGGGAATAAATCTCTGGCCCTG 220319 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 ||||||||||| || ||||||||| | | ||| | ||||||||| ||||||||||||||| Sbjct 220318 ATTTCTTCTTTACCATGATTCTTTCTGATATCAATGAAATCAAAGATATCTGAGTGCCAT 220259 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 ||||| | ||| || ||||| ||| |||||| ||||||||||| || ||||| Sbjct 220258 GGTTCAACATATATGGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTG 220199 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCT 26160 || || | ||||||||| |||||||||||| |||| ||| | || || || || | Sbjct 220198 GCGGTGTTGTTGAAAACTCTCAACATTGGAA-TAATACCATTAGAGGTACCATTAGTACC 220140 Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220 | ||| | || || || |||||||||| || || | ||| || || ||||| Sbjct 220139 AGCAATATAAGAACCAGTAGATCTAATATTGTTGATGTGCAAACCAATACCGCCAGCGTG 220080 Query 26221 TTT--TGA-AATAGCTGCA-CAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCAC 26276 ||| ||| ||| || || | | ||| || || ||||| || | ||| ||| Sbjct 220079 TTTACTGATAATGGC--CATTTGTTTCAAA--GTTTCAAAAATACCATCAATGGAGTCAT 220024 Query 26277 CTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATA 26336 ||||| | | | ||||||||||| | ||| | || || || || | ||||| | Sbjct 220023 TCTTCATGGCCACAAGGAAACAAGAAGACATTTGGGCATTAGGAGTACCAGCGTTAAACA 219964 Query 26337 ATGTCGGTGTAGCATGAGTATAATATCCTTCA-----CTCAAAGCTGTATAAGTTTCAAG 26391 |||| || | ||||||||| ||||| || | ||||| | |||||||| | Sbjct 219963 ATGTTGGAGAAGCATGAGTGAAATAT--TTGAGAGACATCAAA---TTGTAAGTTTCCAA 219909 Query 26392 AACTTCATCGATATTGTAATTACTAACTTCAATAGCTGTTCTTAACCACATATATTGAGG 26451 |||| |||| | | | ||||||| ||| | || | ||| || Sbjct 219908 CACTTTTGGAATATCTTCACCGTGGATACCAATAGCAACTCTCATGACCAAGTGTTGTGG 219849 Query 26452 TCGTTCAATTACATTATTTTCCGCATCTCTAATCAAATAAGATTTTTCTAAAGTTTTCAA 26511 || |||| || ||| | | ||| | ||| || ||| |||| |||||||| || Sbjct 219848 TCTTTCAGCAACTTTA---CCATTAATTCTCAACAAGTAGGATCTTTCCAAAGTTTTGAA 219792 Query 26512 TCCAAAATAATCATGATTGAAATCTCTTTTTTGTACTATAATTGAATCAAGAAATTCTCT 26571 ||||| || | | |||||||||||| | | ||||||| ||||||| ||| | Sbjct 219791 ACCAAAGTAGTTGTAATTGAAATCTCTGTCATATACTATAGCAGAATCAAATTCATCTTT 219732 Query 26572 ATATTTTTCTACAA 26585 ||||||| |||| Sbjct 219731 GTATTTTTGGACAA 219718 Score = 123 bits (136), Expect = 1e-23 Identities = 325/489 (66%), Gaps = 8/489 (2%) Strand=Plus/Minus Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754 ||||| | ||| ||||| || || ||||| |||||||||||||| |||||||| || Sbjct 221581 GTTCTCAAATAGTACATACCGGTCTTCAAACCTTTCTTCCAACCGTAGAAATGCATAGAA 221522 Query 24755 GTTAGTTTTGCAAT-GTTTGCTGATTC-TAAAAACAAGTTCATCGATTGAGCTTGGCAAA 24812 || | ||| | || ||| | | || | || | ||||| ||||||| ||| || Sbjct 221521 GTCAATTTACCCATAGTTGGGTCCTTGATGTGAATA--TTCATGGATTGAGATTGATCAA 221464 Query 24813 CAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTG 24872 || | |||||| ||||| || ||||| || | || || || || || | | Sbjct 221463 TGAATGGAGCTCTATCAGCAGCCAAATCAATAATTTTCTTTTGAGAAATCTCCCAAACAG 221404 Query 24873 TTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTT 24932 ||||||| ||||| | || ||||| ||| | ||||||| || ||||| Sbjct 221403 TTTTGTACAAATCTTTCAATTCTTGAGGAATGTTTGGTAAGTTTTGAATAGAACCATTAG 221344 Query 24933 CTCTCAATAGATTCAATC--TCATATTCGGTGTCCAAAGATTAATTTTTTCAAGATCTCT 24990 | || ||| ||| ||| |||| | | ||| | | || | | | |||| | Sbjct 221343 CACT-AAT-GATATGATCCTTCATTGAAGTAGACCATAAACCCATGTCAACCAAATCTTT 221286 Query 24991 AATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTT 25050 | ||||| | || | ||| |||||| |||| | ||||||||| | | ||| Sbjct 221285 TAACAAGTATGGGTTAACGATTTGAAATTCGCCAGCAAGAACTCTTCTGGAATAAATGTT 221226 Query 25051 TGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGG 25110 |||||| ||||||||||||||||||| | || || ||||| |||||||| || ||||| Sbjct 221225 AGAAGTGTATGGTTCAAAACATTCATTGTAACCCAAAATTTGGGAAGTAGAAGCAGTTGG 221166 Query 25111 CATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTT 25170 |||| || | || | || ||||||||||||| || | | |||||| | || Sbjct 221165 CATTGGAGCAACCAACAAAGAGTTTCTCAAACCATGCTTCTTGACTTTTTGTTTAACTTC 221106 Query 25171 ATCCCAATC 25179 |||||||| Sbjct 221105 GTCCCAATC 221097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039978412525