Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5 147 3e-30 >seq5 Length=2406875 Score = 147 bits (162), Expect = 3e-30 Identities = 231/324 (71%), Gaps = 9/324 (3%) Strand=Plus/Plus Query 139763 TTTTGCTCTGGTTTCTAGAACTGCTAGAGTTTGTGGGAATATATCTTG--ATCAACTAT- 139819 ||| ||||||| || | ||||| || ||||||||| | || ||| ||| || | Sbjct 486689 TTTGGCTCTGGACTCCAATACTGCAAGGGTTTGTGGG--TGGATGTTGGAATCCACCACA 486746 Query 139820 TAC--AGTCTTCTTATCTCTTGTAGAA-TTATATGCTAACAGCATTGCCTCTGCTGCTGC 139876 || || |||||| | ||||| ||| || |||| || | |||||||||||| || || Sbjct 486747 TAGGTAGGCTTCTTCT-TCTTGGTGAAATTGTATGACAAGATCATTGCCTCTGCGGCAGC 486805 Query 139877 AGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAG 139936 |||| ||||||| |||| || || || |||| ||||| || || || || | |||| Sbjct 486806 AGTTCCTTCATCCAATAACGAGGCATTGGCTACAGGTAACCCAGTGAGATCAGCAATGAC 486865 Query 139937 CGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGT 139996 ||||| ||||| || | | ||| ||||| ||||| || || || | ||||| ||||| Sbjct 486866 AGTTTGATAATTCAAAAGTGATTCTAATCTACCCTGGGAGATTTCTGGCTGATATGGAGT 486925 Query 139997 GTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAAT 140056 || || |||||||| |||| ||||| | ||||| || || || || || || Sbjct 486926 ATATGAGGTGTACCATTCAGGAGCCTCAAACAAGTTTCTTTGGATCACCGGTGGAACTAT 486985 Query 140057 GGTTCCATAGTATCCTTGACCTAT 140080 ||| |||||||| |||| ||| || Sbjct 486986 GGTACCATAGTAACCTTTACCAAT 487009 Score = 93.3 bits (102), Expect = 5e-14 Identities = 187/275 (68%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 139268 TGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCA 139327 || ||||||||| ||||||| ||| |||||| || | || ||||| || || || Sbjct 486176 TGGACCATGATACACTGCATAATTGGCAGCCATATTGGCCAAAAGCGCTTGAGCGGTACA 486235 Query 139328 GATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCT 139387 |||||| || ||||| ||||| | || || || ||||||||||| | |||||||| Sbjct 486236 AATGTTAGAAGTAGCTTTTTCTCTCTTGATGTGTTGTTCTCTAGTTTGCAAGGCTAATCT 486295 Query 139388 GTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCT 139447 |||||| | || || || || || ||| |||||||| || || || ||||| Sbjct 486296 ATATGCACGGTTTCCCAATCTATCTTTAGAAATACCAACAATTCTACCTGGAATTTTTCT 486355 Query 139448 CTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAAT 139507 || | | || | || || ||||||| || || ||||| || | || | Sbjct 486356 ATTCAATTGTTCAACAACAGATAAAAAGCCAGCATGGGGTCCGCCGTAACCTAATGGCAC 486415 Query 139508 ACCAAACCTTTGCATAC-TACCTACAGCAATATCA 139541 |||||| ||||| | || ||| | |||||| ||| Sbjct 486416 ACCAAATCTTTG-AGACGAACCCAAAGCAATGTCA 486449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998349337640