Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 3e-30
>seq5
Length=2406875
Score = 147 bits (162), Expect = 3e-30
Identities = 231/324 (71%), Gaps = 9/324 (3%)
Strand=Plus/Plus
Query 139763 TTTTGCTCTGGTTTCTAGAACTGCTAGAGTTTGTGGGAATATATCTTG--ATCAACTAT- 139819
||| ||||||| || | ||||| || ||||||||| | || ||| ||| || |
Sbjct 486689 TTTGGCTCTGGACTCCAATACTGCAAGGGTTTGTGGG--TGGATGTTGGAATCCACCACA 486746
Query 139820 TAC--AGTCTTCTTATCTCTTGTAGAA-TTATATGCTAACAGCATTGCCTCTGCTGCTGC 139876
|| || |||||| | ||||| ||| || |||| || | |||||||||||| || ||
Sbjct 486747 TAGGTAGGCTTCTTCT-TCTTGGTGAAATTGTATGACAAGATCATTGCCTCTGCGGCAGC 486805
Query 139877 AGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTGTAAGTTCTGTGATGAG 139936
|||| ||||||| |||| || || || |||| ||||| || || || || | ||||
Sbjct 486806 AGTTCCTTCATCCAATAACGAGGCATTGGCTACAGGTAACCCAGTGAGATCAGCAATGAC 486865
Query 139937 CGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGATAGGGAGT 139996
||||| ||||| || | | ||| ||||| ||||| || || || | ||||| |||||
Sbjct 486866 AGTTTGATAATTCAAAAGTGATTCTAATCTACCCTGGGAGATTTCTGGCTGATATGGAGT 486925
Query 139997 GTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGGGTGTAAT 140056
|| || |||||||| |||| ||||| | ||||| || || || || || ||
Sbjct 486926 ATATGAGGTGTACCATTCAGGAGCCTCAAACAAGTTTCTTTGGATCACCGGTGGAACTAT 486985
Query 140057 GGTTCCATAGTATCCTTGACCTAT 140080
||| |||||||| |||| ||| ||
Sbjct 486986 GGTACCATAGTAACCTTTACCAAT 487009
Score = 93.3 bits (102), Expect = 5e-14
Identities = 187/275 (68%), Gaps = 2/275 (1%)
Strand=Plus/Plus
Query 139268 TGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCA 139327
|| ||||||||| ||||||| ||| |||||| || | || ||||| || || ||
Sbjct 486176 TGGACCATGATACACTGCATAATTGGCAGCCATATTGGCCAAAAGCGCTTGAGCGGTACA 486235
Query 139328 GATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCT 139387
|||||| || ||||| ||||| | || || || ||||||||||| | ||||||||
Sbjct 486236 AATGTTAGAAGTAGCTTTTTCTCTCTTGATGTGTTGTTCTCTAGTTTGCAAGGCTAATCT 486295
Query 139388 GTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCT 139447
|||||| | || || || || || ||| |||||||| || || || |||||
Sbjct 486296 ATATGCACGGTTTCCCAATCTATCTTTAGAAATACCAACAATTCTACCTGGAATTTTTCT 486355
Query 139448 CTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAAT 139507
|| | | || | || || ||||||| || || ||||| || | || |
Sbjct 486356 ATTCAATTGTTCAACAACAGATAAAAAGCCAGCATGGGGTCCGCCGTAACCTAATGGCAC 486415
Query 139508 ACCAAACCTTTGCATAC-TACCTACAGCAATATCA 139541
|||||| ||||| | || ||| | |||||| |||
Sbjct 486416 ACCAAATCTTTG-AGACGAACCCAAAGCAATGTCA 486449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998349337640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |