Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1 282 6e-71 seq4 132 7e-26 seq3 122 1e-22 >seq1 Length=4909981 Score = 282 bits (312), Expect = 6e-71 Identities = 507/732 (69%), Gaps = 16/732 (2%) Strand=Plus/Plus Query 17981 AATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGT 18040 || ||||| || || |||||||| |||||||| ||||||| | ||||| || | Sbjct 4604558 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4604617 Query 18041 AGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTA 18098 || |||| || | |||||| ||| ||||||| || || |||| ||| | | Sbjct 4604618 AGA--GAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAA 4604675 Query 18099 TTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTAT-AATATAATAAA 18157 | || ||| || | | ||| | || || || || | | | || | || || Sbjct 4604676 TAATCTTTTCAACAATT--TCTTG--ATTTGGTTTGTTTTGCAAGTGTGAAAACAACAAG 4604731 Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 || || || || || || ||||||||||||||| | || ||||| ||| || ||||| Sbjct 4604732 CAAGCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAA 4604791 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 || ||||| |||||||| ||||||| |||||| || || || ||| || ||| ||||| Sbjct 4604792 CCTGGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAA 4604851 Query 18278 ATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAG 18336 ||||| ||||| ||| || || || | |||||||| || |||| || | ||| Sbjct 4604852 ATACCTTCAACAGCA-GCAAAGGCAACCAATCTTTC-GCCAAACAAAGCTTGGTCATCAT 4604909 Query 18337 T-ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCAT 18395 | |||||| | |||||| || ||| ||||| || ||| | || ||||||| Sbjct 4604910 TGATCCATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCAT 4604969 Query 18396 TAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACA 18455 ||||||| || |||||| | ||| || |||||||| || || ||||||||||| Sbjct 4604970 TAAACAAGAATTCAGATTCTTTTGGATCCTTAATATAAGTATCAATCAACAAAGAATAAG 4605029 Query 18456 TTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGAT 18515 |||||||||||||| ||||||| || || |||| || || || | || || ||| Sbjct 4605030 TTTCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGAC 4605089 Query 18516 ATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATG 18575 |||||| ||| | | || |||| ||||| || || ||||| ||||||||| || | Sbjct 4605090 ATTGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAG 4605149 Query 18576 CGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCC 18632 | || |||||||| || |||||||| | |||||||| | || | ||||||| Sbjct 4605150 CAAAGAATGCCAAGACTCTGGAAATGAAATATCTTTCATTAGCATTCAATCTGTTGTTCC 4605209 Query 18633 ATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCT 18692 | || | | |||||| | |||| |||||| | ||||||||||| | ||| |||| Sbjct 4605210 AGTCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCT 4605269 Query 18693 GTTTGTACATTT 18704 |||||||||| Sbjct 4605270 TCTTGTACATTT 4605281 Score = 241 bits (266), Expect = 2e-58 Identities = 604/907 (67%), Gaps = 30/907 (3%) Strand=Plus/Plus Query 17883 TTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAATGGAT 17942 ||||||| |||||||| || || ||| ||||||| || | ||||||||||||||||| Sbjct 3917472 TTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTTTCCATAAAATCAAATGGAT 3917531 Query 17943 TAGTGGTTTTATA-ATATTTTTCTTGT---ATTAATTCGTATAATAATCTATCTGCTACA 17998 |||| || || || ||||| || | || || ||||||||||| || ||| Sbjct 3917532 TAGTAACATTGTAGATCTTTTTTCTGCCCAAAGAAATC----AATAATCTATCAGCCACA 3917587 Query 17999 AATTCGACATATTGTGACATCAA---ATCGCAATTCATACCTAGTAGTCTGAAAGGTAGA 18055 || || || || || |||||| | || ||||| || || | | || || Sbjct 3917588 AACTCAACGTACTGATTCATCAATGAAGCG---TTCATTCCAAGCAAAGAAACAGATAAT 3917644 Query 18056 GCATCAATAATA-AATTCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTATTACCCT 18114 || || || | || |||| || || ||||| | |||| ||||||| ||||| | | Sbjct 3917645 GCTTCGTCAAAATAACGCTTT-TCAATTTCAACCGCCTCTGTTATTAT-TTTATCAACT- 3917701 Query 18115 AGATTTTGGCAATTTATTAATTATGTGATTAT-AATATAATAAACACGCAAAATCAGTGT 18173 |||| ||| || || | | | |||| |||||||| ||||||||||| | Sbjct 3917702 --ATTTCTGCATCAGGTTTGTTTTCCAAATGCGAATACAATAAACAGGCAAAATCAGTAT 3917759 Query 18174 GTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTC 18233 | | ||||||||| | | || || || || || || | |||||||| | ||||| Sbjct 3917760 GAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCGGGCATAAGACCTC 3917819 Query 18234 ttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAACGCACG 18293 |||| || |||||||||||||| |||||| || ||||| |||||||| |||||| | Sbjct 3917820 TTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATACCTTCAACGGCAG 3917879 Query 18294 CGAACGCTATTAATCTTTCAGCA---AAACTGTATTTATTGCTCAGTATCCATTTTTGTG 18350 | || |||| ||||||||||||| ||| || || | | ||| |||||| | | | Sbjct 3917880 CAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCA-TCTTCA--ATCCATCTAAGCG 3917936 Query 18351 CCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCTT 18410 |||| ||| ||| || || || || | || || |||||||| ||| || Sbjct 3917937 CCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAATAAAAATTCGG 3917996 Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470 | || | ||| |||||||| || || |||| ||| || | || ||||| | Sbjct 3917997 CCTGTTCAGGATCCAGAATATAAGTATCTATCAACAGAGAGTATGTCTCTGAATGAACAT 3918056 Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTAT 18530 | ||||| ||| ||||||| |||||| || | || |||||| || | | | || Sbjct 3918057 TCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAATCTGTACTTGGGTAG 3918116 Query 18531 AAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAA 18590 | || | | ||| | |||||||||||| || || || | | || |||||||| | | Sbjct 3918117 AGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCGGCAAAAAATGCTAGCA 3918176 Query 18591 CATATTTAATGAAATGTTTTTCAT---TATCCTTGAGATTGTTCCATTCATCTATATCTT 18647 | ||||||| | ||||| ||| | || |||||| |||| | ||| | Sbjct 3918177 CTCTGGAAATGAAAAACTGTTCATTGCTATTCAACTTATAGTTCCAATCATGCAAATCCT 3918236 Query 18648 TTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTTTAT 18707 | ||||||| ||| || | ||||| ||||| | ||| || | ||||||||||| Sbjct 3918237 TACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTCTGCTTTTTTGTACATTTGCC 3918296 Query 18708 AAATATCTTCATGTTGTATAGGAAATAATATATATCGTTTATAATTTTTTATTAACATAG 18767 | || || | | | ||| |||||||||| | | || || | |||| | | | || | Sbjct 3918297 ATATTTCATGGTACTTTATGGGAAATAATACAAAGCGCTTTTTGTTTTCTTTGAGTATCG 3918356 Query 18768 GTTCTTC 18774 | ||||| Sbjct 3918357 GCTCTTC 3918363 Score = 206 bits (228), Expect = 4e-48 Identities = 569/860 (66%), Gaps = 31/860 (4%) Strand=Plus/Minus Query 17860 AGCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATAT 17919 |||||||| ||| || |||| | || || ||||| || ||||| || | ||||| || Sbjct 4056752 AGCTTTTTGGTAATCAGAGACTCTCTTTTCAAAGAAGTTGGTCTTACCAGCTAATGAGAT 4056693 Query 17920 TAAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATT--AATT 17975 | ||| |||||||||||||| | ||| || | ||||||| ||| Sbjct 4056692 ATTTTCCATGAAATCAAATGGATTGTTAACGTTGTACACC----TTCTTGTTACCCAATG 4056637 Query 17976 CGTATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATAC 18035 || ||||| || || || || || |||||||| |||| || ||||||||||| Sbjct 4056636 ACACCAACAATCTGTCAGCAACGAACTCTACATATTGGCACATTAATGTGCAATTCATAC 4056577 Query 18036 CTAGTAGTCTGAAA--GGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTC 18093 | | | | |||| || | |||||| | | | | ||||| || || ||||| | || Sbjct 4056576 CCAACAAT--GAAACTGGCAAGGCATCAGTGAAATACTCTTTTTCAATATCAACTGCTTC 4056519 Query 18094 TTTTATTATGTTTATTACCCTAGATTTTGGCAATTTATTAATTATGTGATTAT-AATATA 18152 | || || ||| || |||| ||| | | || | | | || | | Sbjct 4056518 AGTGATAATCTTTTCAACA----ATTTCTGCAGGTGGCTTGTTTTCCAAATGGGAAAACA 4056463 Query 18153 ATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACG 18212 | ||||| ||||| || ||||| ||||||||||||||||| || | |||||| || | Sbjct 4056462 ACAAACAGGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAG 4056403 Query 18213 TTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAA 18272 | ||||| ||||| | ||| || ||||| | ||| || || || || ||| || ||| | Sbjct 4056402 TCAACCCTGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGA 4056343 Query 18273 AGAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCA---AAACTGTATTTA 18328 |||| ||||| ||||| ||| || || || | ||||||||| || ||| | | | Sbjct 4056342 AGAAAATACCTTCAACAGCA-GCAAAGGCAACCAATCTTTCACCAAATAAAGCCTCATCA 4056284 Query 18329 TTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCT 18388 | | | |||||| | ||||| || ||| ||||| || ||| | || Sbjct 4056283 TCGTT---GATCCATCTCAAAGCCCAGTCGGCTT-TTGCTTTATACATGGGATAGTTTCA 4056228 Query 18389 ATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAA 18448 || ||||| || ||| || |||||| | || || || ||||| || |||| |||| Sbjct 4056227 ATGGCATTGAATAAAAATTCAGATTCTTTTGGGTCCTTGATGTAAGTATCAATTAGCAAA 4056168 Query 18449 GAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCC 18508 || || ||||||| || || ||||||| || || |||| |||||| || | || Sbjct 4056167 GAGTAAGTTTCAGAGTGAATATTTTCCATCATAATTTGGAAACCATAAAAGAATTTGGCT 4056108 Query 18509 TCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCA 18568 || ||| |||| | ||| | | || |||| ||||| || ||||| || ||||| ||| Sbjct 4056107 TCTGGACATTGCACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCATTGACAATACCATCA 4056048 Query 18569 GCAGATGCGAAAAATGCCAAAACATATTTA-ATGAAATGTTTTTCATTATCCTTGAGATT 18627 || || || || ||||| || | | | | ||||| | |||| || | || | || Sbjct 4056047 CTAGCAGCAAAGAAAGCCAACAC-TCTAGAGAGGAAATATCTTTCGTTGGCATTCAACTT 4055989 Query 18628 G---TTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGA 18684 | ||||| |||| |||||||| | || | ||||| | ||||| || || | Sbjct 4055988 GTCATTCCAGTCATGCATATCTTTACTCAAGTCGATCTCTTCAGCAGTCCAGAATGAAGC 4055929 Query 18685 TTCGGCCTGTTTGTACATTT 18704 ||| |||| |||||||||| Sbjct 4055928 TTCAGCCTTCTTGTACATTT 4055909 Score = 136 bits (150), Expect = 6e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| | || || || ||||| ||||| || || || ||||| ||| |||| Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || || || || || ||||| || ||||| || || ||||| ||| Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||| |||||||| | |||||| |||||| || || || || || Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | ||||| || || ||||| ||||| ||| Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGGT 2135669 Score = 134 bits (148), Expect = 2e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| || | || || || ||||| ||||| || || || ||||| ||| ||| Sbjct 2136125 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTC 2136066 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||| | |||| || || || || || ||||| || ||||| || || ||||| || Sbjct 2136065 TGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 2136006 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||||||||||| ||| ||||||||| | |||||| |||||| || || || || || Sbjct 2136005 ACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTACAA 2135946 Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || ||||| | || | || || || || ||||| ||||| ||| Sbjct 2135945 CATCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGGT 2135897 >seq4 Length=2685930 Score = 132 bits (146), Expect = 7e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895 ||||||| |||||||| ||||| ||||| || ||||||||| ||| || | ||| | Sbjct 2595162 TTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACA 2595103 Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955 | || ||| || || ||||| |||||||| || || || || |||||||||||||| | Sbjct 2595102 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCT 2595043 Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGG 156015 ||| ||||| || | |||||| |||||| | || || || ||||| ||||| Sbjct 2595042 TTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAAGAAT 2594983 Query 156016 CGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 | || | ||||| || || ||||| ||||| |||| Sbjct 2594982 CTACTTTGCATTTGGTCTTGAGATTGAGAGGTGGTG 2594947 >seq3 Length=2682731 Score = 122 bits (134), Expect = 1e-22 Identities = 173/240 (72%), Gaps = 5/240 (2%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| || ||||||| || || || || || ||||| | ||||||||| Sbjct 829810 AAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCC 829751 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | |||| || || ||| || || ||||| |||||||| || || || || Sbjct 829750 TCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 829691 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 |||||||||||||| | ||| ||||| || | |||||| |||||||| || || || Sbjct 829690 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 829631 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAA 156056 | | ||||||| || | || | || || || || ||||| ||||| ||| |||||| Sbjct 829630 A--ACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGGTAAAA 829573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871935961200