Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 179 7e-40 seq4 167 5e-36 seq3 165 2e-35 >seq1 Length=4909981 Score = 179 bits (198), Expect = 7e-40 Identities = 478/733 (65%), Gaps = 16/733 (2%) Strand=Plus/Plus Query 49647 AATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAAT 49706 || ||||| || || ||||||||||||||||| |||| |||| | ||||| ||||| Sbjct 4604558 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4604617 Query 49707 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 49766 | || ||| || ||||| || |||||||||| || ||||| | |||| Sbjct 4604618 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4604677 Query 49767 atcataattatattattttttgataatttatatttaatatgattcgcatatattaaACAT 49826 ||| | || | |||| ||||| | | ||| | | | | | | | || || Sbjct 4604678 ATCTT--TTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGT-GAAAACAACAAGCAA 4604734 Query 49827 GCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 49886 || || || ||||| ||||| || || || | || ||||||||| || ||||| ||| Sbjct 4604735 GCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCT 4604794 Query 49887 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 49946 ||||| | ||||||||||| | |||||| || || |||||| || ||| ||||| ||| Sbjct 4604795 GGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATA 4604854 Query 49947 CCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATC 50006 || || ||| ||||| || | | |||| | ||||||| || ||||| ||| Sbjct 4604855 CCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATC 4604914 Query 50007 CAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTA--- 50063 || | | ||||| || |||||||| || ||| | || ||| |||| ||||| ||| Sbjct 4604915 CATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAAC 4604974 Query 50064 AATAATTC--AtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACA 50121 || ||||| ||| |||| || || |||||||| Sbjct 4604975 AAGAATTCAGATTCTTTT-----GGATCCTTAATATAAGTATCAATCAACAAAGAATAAG 4605029 Query 50122 TTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAAT 50181 |||||||||||| |||||| ||||| || || || | | ||||||| | Sbjct 4605030 TTTCAGAATGTATGTTTTCCATCATGATTTGGAAACCGTAGAAACATTTGGCTTCTGGAC 4605089 Query 50182 ACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTG 50241 | |||||||||| | |||| |||||| || || || || ||||| ||| || | Sbjct 4605090 ATTGAACTTCGGCAGAGAAGTTTTCAACCAAGTTTTCGTTAACGATACCGTCACTAGCAG 4605149 Query 50242 CGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCC 50298 | |||||||| || || ||| |||| | |||||||| | || || || | || Sbjct 4605150 CAAAGAATGCCAAGACTCTGGAAATGAAATATCTTTCATTAGCATTCAATCTGTTGTTCC 4605209 Query 50299 AAGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATT 50358 | | | ||| || || || | |||||| |||||||| || ||| | | | Sbjct 4605210 AGTCGTGCAAATCTTTACTCAAGTCAATTTCTTCAGCAGTCCAAAAAGAGGCTTCAGCCT 4605269 Query 50359 TTTTATACATTTG 50371 | || |||||||| Sbjct 4605270 TCTTGTACATTTG 4605282 Score = 172 bits (190), Expect = 1e-37 Identities = 553/857 (65%), Gaps = 20/857 (2%) Strand=Plus/Plus Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AATA 49650 |||||||||||||||||| | ||| || || ||| | || | | | | || |||| Sbjct 3917515 CATAAAATCAAATGGATTAGTAACATTGTAG-ATCTTTTTTCTGCCCAAAGAAATCAATA 3917573 Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710 ||||||| || ||||| ||||| || || ||| ||| | ||||| || | || Sbjct 3917574 ATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAGCAAAG 3917633 Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770 || | |||||| || |||| | | ||||| ||||| || || | | | ||||| Sbjct 3917634 AAACAGATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTATTATTT 3917693 Query 49771 taattatattattttttgataa--tttatatttaatatgattcgcatatattaaACATGC 49828 || | | ||||| | || | ||| | || | ||| || ||| | |||||| || Sbjct 3917694 TA--TCAACTATTTCTGCATCAGGTTTGTTTTCCAAATG---CGAATACAATAAACAGGC 3917748 Query 49829 AAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 49888 |||||||||||| | ||| || || | | | || || ||||| ||||| | || || Sbjct 3917749 AAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCGGG 3917808 Query 49889 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACC 49948 ||| | ||||| || || ||||||||||| || || ||| || ||||| |||||||| Sbjct 3917809 CATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATACC 3917868 Query 49949 CTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCCA 50008 || || |||||||||| || |||| | |||| | | |||||| ||||| Sbjct 3917869 TTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATCCA 3917928 Query 50009 ATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT-- 50066 | | ||||| |||||||||| ||| || | || || | || || || |||||| Sbjct 3917929 TCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAATAA 3917988 Query 50067 -AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125 ||||| | |||| || || | ||| || | || Sbjct 3917989 AAATTCGGCCTGTTCA---GGATCCAGAATATAAGTATCTATCAACAGAGAGTATGTCTC 3918045 Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185 ||||| ||| ||||| ||||||||| |||||| | | ||||| | | ||| Sbjct 3918046 TGAATGAACATTCTCCATCATTATTTGAAAACCATAAAAGCATTTGGCTTCGGGAATCTG 3918105 Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245 |||| || | |||| | || | ||||||| || || ||||| ||||| || || Sbjct 3918106 TACTTGGGTAGAGAAATTCTGTACAAGATTCTCATTAACGATGCCATCCGATGCGGCAAA 3918165 Query 50246 GAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATT----TTCCCAAG 50301 ||||||| || ||| ||| | |||||| || || || |||| | Sbjct 3918166 AAATGCTAGCACTCTGGAAATGAAAAACTGTTCATTGCTATTCAACTTATAGTTCCAATC 3918225 Query 50302 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTT 50361 || ||| ||| || | ||| | ||| || ||||| || || ||| | | ||||| Sbjct 3918226 ATGCAA-ATCCTTACCAAGATCAATTTCCTCGGCGGTCCAGAAAGAAGCTTCTGCTTTTT 3918284 Query 50362 TATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGTAtttt 50421 | |||||||| |||| ||| | | |||||||||| |||| | || || | |||| Sbjct 3918285 TGTACATTTGCCATATTTCATGGTACTTTATGGGAAATAATACAAAGCGCTTTTTGTTTT 3918344 Query 50422 tttCTAATATCGGTTCT 50438 || | |||||| ||| Sbjct 3918345 CTTTGAGTATCGGCTCT 3918361 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || ||||| || || | ||||| || || || ||||| Sbjct 2135669 ACCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGA 2135728 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| |||||||| ||||||||||| || ||||| ||||| || ||||| Sbjct 2135729 CAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2135788 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || ||||| || ||||| || || || ||||| |||| || || ||||| || Sbjct 2135789 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2135848 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||| | ||| ||||||||||||||||| || || | ||| || ||||| Sbjct 2135849 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | | || || || || || || | ||||| ||| || || ||| Sbjct 2135895 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCA 2135954 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || |||| |||| ||||| || ||||||||||| || ||||| ||||| || ||| Sbjct 2135955 GACAAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2136014 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| || || || ||||| |||| || || ||||| Sbjct 2136015 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2136074 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | ||| ||||||||||||||||| || || | || || |||||| Sbjct 2136075 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 >seq4 Length=2685930 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || ||||| ||||||| ||||| |||||| || ||||| Sbjct 2594948 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 2595007 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | |||| |||| ||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct 2595008 AAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 2595067 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| || || ||| ||||| || | || || ||||| || Sbjct 2595068 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2595127 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAA 192523 ||| | ||||||||||||||||| || ||||||| Sbjct 2595128 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAA 2595162 >seq3 Length=2682731 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | || || || || || || | || || ||| || || ||||| Sbjct 829580 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 829639 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 || |||| |||| ||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 829640 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 829699 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| || || ||| ||||| |||| || || ||||| || Sbjct 829700 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 829759 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || |||||||| ||||| ||||| ||||||| || || ||||| || Sbjct 829760 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479911704450