Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1 192 1e-43 seq4 161 2e-34 seq3 156 8e-33 >seq1 Length=4909981 Score = 192 bits (212), Expect = 1e-43 Identities = 371/542 (68%), Gaps = 9/542 (2%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||| || ||||| || |||| || || || || ||||| ||| | ||||| || Sbjct 3917453 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3917512 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AA 38950 | |||||||||||||||||| | ||| || || ||| | || | | | | || || Sbjct 3917513 TCCATAAAATCAAATGGATTAGTAACATTGTAG-ATCTTTTTTCTGCCCAAAGAAATCAA 3917571 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 ||||||||| |||||||| ||||| || || ||| ||| | ||||| || | || Sbjct 3917572 TAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAGCAA 3917631 Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070 || | |||||| || |||| | | ||||| ||||| || || | | | ||||| Sbjct 3917632 AGAAACAGATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTATTAT 3917691 Query 39071 cataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACAT 39128 || | | ||||| | || | ||| | || | ||| || ||| | |||||| Sbjct 3917692 TTTA--TCAACTATTTCTGCATCAGGTTTGTTTTCCAAATG---CGAATACAATAAACAG 3917746 Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188 |||||||| ||||| | |||||| || | | | || || ||||| ||||| | || Sbjct 3917747 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3917806 Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248 ||||| | ||||| || || ||||||||||| || || ||| || ||||| |||||| Sbjct 3917807 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3917866 Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308 || || || |||||||||| || |||| | |||| | | |||||| |||| Sbjct 3917867 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATC 3917926 Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368 || | | ||||| |||||||||| ||| || | || || | || || || |||||| Sbjct 3917927 CATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAAT 3917986 Query 39369 AA 39370 || Sbjct 3917987 AA 3917988 Score = 188 bits (208), Expect = 1e-42 Identities = 370/542 (68%), Gaps = 9/542 (2%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| || |||||| | ||||| || ||||| ||||| || | || || || Sbjct 4604441 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4604500 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTT-TTCT--CCTATCAATACATAT 38948 | |||||| || ||||| || | ||| ||| || || | || ||| || Sbjct 4604501 TCCATAAAGTCGAATGGGTTGGTAACATTGTAAACCTTCTTGTTGCC---CAAAGCAACC 4604557 Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008 || ||||| || || ||||||||||||||||| |||| |||| | ||||| ||||| Sbjct 4604558 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4604617 Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068 | || ||| || ||||| || |||||||||| || ||||| | |||| Sbjct 4604618 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4604677 Query 39069 atcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACAT 39128 ||| | || | |||| ||||| | | ||| | | | | | | | || || Sbjct 4604678 ATCTT--TTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGT-GAAAACAACAAGCAA 4604734 Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188 || || || ||||| |||||||| || || | || ||||||||| || ||||| ||| Sbjct 4604735 GCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCT 4604794 Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248 ||||| | ||||||||||| | |||||| || || |||||| || ||| ||||| ||| Sbjct 4604795 GGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATA 4604854 Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308 || || ||| ||||| || | | |||| | ||||||| || ||||| ||| Sbjct 4604855 CCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATC 4604914 Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368 || | | ||||| || |||||||| || ||| | || ||| |||| ||||| ||||| Sbjct 4604915 CATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAAC 4604974 Query 39369 AA 39370 || Sbjct 4604975 AA 4604976 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || ||||| || || | ||||| ||| || || || || Sbjct 2135669 ACCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGA 2135728 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 || | || | || |||||||| |||||||||||||| ||||| |||||||| ||||| Sbjct 2135729 CAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2135788 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| || ||||| || || || ||||| ||||| || || ||||| || Sbjct 2135789 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2135848 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| | ||| ||||||||||||||||| || || | || || ||||| Sbjct 2135849 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || || || || | ||||| || || || || Sbjct 2135895 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCA 2135954 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || | || ||||| || |||||||||||||| ||||| |||||||| ||| Sbjct 2135955 GACAAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2136014 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| || || || ||||| ||||| || || ||||| Sbjct 2136015 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2136074 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | ||| ||||||||||||||||| || || | ||| || |||||| Sbjct 2136075 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 >seq4 Length=2685930 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || ||||| ||||||| ||||| ||||| || || || Sbjct 2594948 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 2595007 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | || | || |||||||||||||||||||| || ||||| |||||||||||||| Sbjct 2595008 AAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 2595067 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||| ||||| || || ||| ||||| || || || || ||||| || Sbjct 2595068 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2595127 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 ||| | ||||||||||||||||| || ||||||| ||| Sbjct 2595128 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2595166 >seq3 Length=2682731 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || || || || || | || || || || || || || Sbjct 829580 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 829639 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| || | || |||||||||||||||||||| || ||||| ||||| |||||||| Sbjct 829640 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 829699 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||| ||||| || || ||| ||||| ||||| || || ||||| || Sbjct 829700 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 829759 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||| || |||||||| ||||| ||||| ||||||| ||| || ||||| || Sbjct 829760 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135920800600