Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1 192 1e-43
seq4 161 2e-34
seq3 156 8e-33
>seq1
Length=4909981
Score = 192 bits (212), Expect = 1e-43
Identities = 371/542 (68%), Gaps = 9/542 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||||| || |||| || || || || ||||| ||| | ||||| ||
Sbjct 3917453 TTTTGATAATCAGATACCCTTTTCTCAAAGAAATTAGTTTTCCCTGCCAATGAAATGTTT 3917512
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATAT-AA 38950
| |||||||||||||||||| | ||| || || ||| | || | | | | || ||
Sbjct 3917513 TCCATAAAATCAAATGGATTAGTAACATTGTAG-ATCTTTTTTCTGCCCAAAGAAATCAA 3917571
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| |||||||| ||||| || || ||| ||| | ||||| || | ||
Sbjct 3917572 TAATCTATCAGCCACAAACTCAACGTACTGATTCATCAATGAAGCGTTCATTCCAAGCAA 3917631
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
|| | |||||| || |||| | | ||||| ||||| || || | | | |||||
Sbjct 3917632 AGAAACAGATAATGCTTCGTCAAAATAACGCTTTTCAATTTCAACCGCCTCTGTTATTAT 3917691
Query 39071 cataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACAT 39128
|| | | ||||| | || | ||| | || | ||| || ||| | ||||||
Sbjct 3917692 TTTA--TCAACTATTTCTGCATCAGGTTTGTTTTCCAAATG---CGAATACAATAAACAG 3917746
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|||||||| ||||| | |||||| || | | | || || ||||| ||||| | ||
Sbjct 3917747 GCAAAATCAGTATGAAGACCTTCATCGCGACAAATCAACTCATTGGAGAAAGTAAGACCG 3917806
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248
||||| | ||||| || || ||||||||||| || || ||| || ||||| ||||||
Sbjct 3917807 GGCATAAGACCTCTTTTCTTGAGCCAAAATATCGAAGCGAAAGAACCGGAAAAAAATATA 3917866
Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308
|| || || |||||||||| || |||| | |||| | | |||||| ||||
Sbjct 3917867 CCTTCAACGGCAGCAAATGCTACTAATCTTTCAGCAAATAAAGCGTCTTCATCTTCAATC 3917926
Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368
|| | | ||||| |||||||||| ||| || | || || | || || || ||||||
Sbjct 3917927 CATCTAAGCGCCCAGTCTGCTTTTTCTTTAATGCATGGAATTGTATCAATTGCATTAAAT 3917986
Query 39369 AA 39370
||
Sbjct 3917987 AA 3917988
Score = 188 bits (208), Expect = 1e-42
Identities = 370/542 (68%), Gaps = 9/542 (2%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| || |||||| | ||||| || ||||| ||||| || | || || ||
Sbjct 4604441 TTTTGGTAGTCGGAAACTCTCTTTTCAAAGAAGTTAGTTTTACCGGCCAAAGAAATGTTT 4604500
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTT-TTCT--CCTATCAATACATAT 38948
| |||||| || ||||| || | ||| ||| || || | || ||| ||
Sbjct 4604501 TCCATAAAGTCGAATGGGTTGGTAACATTGTAAACCTTCTTGTTGCC---CAAAGCAACC 4604557
Query 38949 AATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAAT 39008
|| ||||| || || ||||||||||||||||| |||| |||| | ||||| |||||
Sbjct 4604558 AACAATCTGTCAGCAACAAATTCAACATATTGGCACATCAATTTAGCGTTCATGCCCAAA 4604617
Query 39009 AATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaatt 39068
| || ||| || ||||| || |||||||||| || ||||| | ||||
Sbjct 4604618 AGAGAAACTGGCAAAGCATCGGTAAAGTATTCTTTTTCAATAGTGACAGCCTCGGTAATA 4604677
Query 39069 atcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACAT 39128
||| | || | |||| ||||| | | ||| | | | | | | | || ||
Sbjct 4604678 ATCTT--TTCAACAATTTCTTGATTTGGTTTGTTTTGCAAGTGT-GAAAACAACAAGCAA 4604734
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|| || || ||||| |||||||| || || | || ||||||||| || ||||| |||
Sbjct 4604735 GCGAAGTCGGTATGCAAACCTTCATCTCTGCAAATCAATTCATTAGAGAAGGTTAAACCT 4604794
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248
||||| | ||||||||||| | |||||| || || |||||| || ||| ||||| |||
Sbjct 4604795 GGCATCATACCTCTCTTTTTTAACCAAAAGATAGAAGCAAAAGAACCAGAGAAGAAAATA 4604854
Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308
|| || ||| ||||| || | | |||| | ||||||| || ||||| |||
Sbjct 4604855 CCTTCAACAGCAGCAAAGGCAACCAATCTTTCGCCAAACAAAGCTTGGTCATCATTGATC 4604914
Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368
|| | | ||||| || |||||||| || ||| | || ||| |||| ||||| |||||
Sbjct 4604915 CATCTCAATGCCCAGTCAGCTTTTTTCTTAATACATGGGATAGTTTCAATAGCATTAAAC 4604974
Query 39369 AA 39370
||
Sbjct 4604975 AA 4604976
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || ||||| || || | ||||| ||| || || || ||
Sbjct 2135669 ACCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGA 2135728
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|| | || | || |||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct 2135729 CAAGGTTCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2135788
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| ||||| || ||||| || || || ||||| ||||| || || ||||| ||
Sbjct 2135789 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 2135848
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||| | ||| ||||||||||||||||| || || | || || |||||
Sbjct 2135849 TTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || || || | ||||| || || || ||
Sbjct 2135895 ATACCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCA 2135954
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || ||||| || |||||||||||||| ||||| |||||||| |||
Sbjct 2135955 GACAAGGTTCTGCCATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGT 2136014
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || || ||||| ||||| || || |||||
Sbjct 2136015 GGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCA 2136074
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| | ||| ||||||||||||||||| || || | ||| || ||||||
Sbjct 2136075 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125
>seq4
Length=2685930
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || ||||| ||||||| ||||| ||||| || || ||
Sbjct 2594948 ACCACCTCTCAATCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 2595007
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | || | || |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 2595008 AAGGGTTCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 2595067
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| |||||||| ||||| || || ||| ||||| || || || || ||||| ||
Sbjct 2595068 AATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGAC 2595127
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060
||| | ||||||||||||||||| || ||||||| |||
Sbjct 2595128 TTCCAAGGTAATGGTTTTACCAGTCAAAGTTTTAACGAA 2595166
>seq3
Length=2682731
Score = 156 bits (172), Expect = 8e-33
Identities = 173/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || || || || || | || || || || || || ||
Sbjct 829580 ACCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGA 829639
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|||| || | || |||||||||||||||||||| || ||||| ||||| ||||||||
Sbjct 829640 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGG 829699
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| |||||||| ||||| || || ||| ||||| ||||| || || ||||| ||
Sbjct 829700 AATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGAC 829759
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||| || |||||||| ||||| ||||| ||||||| ||| || ||||| ||
Sbjct 829760 TTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135920800600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |