Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 147 6e-30 seq1 136 1e-26 seq5 95.1 4e-14 >seq2 Length=4155432 Score = 147 bits (162), Expect = 6e-30 Identities = 595/924 (64%), Gaps = 19/924 (2%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||| ||| |||| ||||| || ||||| || || || || ||||| ||||| |||| Sbjct 220698 CAACAGAAGCCAAGTTACAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCAC 220639 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | |||| ||| ||| ||||| || | |||||| ||||| |||||| ||||||| Sbjct 220638 AACACAAGTTGGAAGATTTGATAAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAG 220579 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT-CTTTAGC 155765 |||| || || | ||| |||| || || || || | || || |||| ||| || || | Sbjct 220578 CATCTTTATACAACATGAATGGAGTACCAGTTTCAGTTTGAGCTTCCAAAATGCTGTA-C 220520 Query 155766 CAGAGGTCACGGGCATTAATTTGCTTGTTGTA--TCTGCCTTCCGACTCATATTTCATAT 155823 || | | |||| |||| | || || || ||||||||| ||||||||| || Sbjct 220519 CACAACTTTTGGGCCTTAA--CGGTTCTTCTACCTCTGCCTTCTCTTTCATATTTCTCAT 220462 Query 155824 ACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCA-CTT-ATCGGGGCA 155881 | || | | | | || ||||| ||| ||| || || || ||| || ||| | Sbjct 220461 AAAGGGCTTCGAATTCTTCACCATAAGTGTCAGCCAAACC--TTCAGCTTCATTAGGGGA 220404 Query 155882 AAACAGCGACCAAATTTTATTACCGATT--ACACGCTCCATAAATACATCACTCGCCCAA 155939 ||||| | ||| || || | || || | || |||||||| || ||| Sbjct 220403 AAACAAGGTCCAGTCTTGGTT--CTTTTCAACTCTCTTCATAAATAAGTCGGAGATCCAT 220346 Query 155940 ATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCT 155999 | ||| ||| | || || ||| | || || | || |||||||| | | || Sbjct 220345 AAAGCTGGGAATAAATCTCTGGCCCTGATTTCTTCTTTACCATGATTCTTTCTGATATCA 220286 Query 156000 AAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTC 156059 | ||| || ||||| | || ||| || | ||| || ||||| |||| || Sbjct 220285 ATGAAATCAAAGATATCTGAGTGCCATGGTTCAACATATATGGCAAAGGCACCAGGTCTT 220226 Query 156060 TTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATA 156116 ||| ||||| ||||| ||||| | || || || ||||| || | | ||| |||||| Sbjct 220225 TTGTTACCACCTTGATCAACATATCTGGCGGTGTTGTTGAAAACTCTCAACATTGGAATA 220166 Query 156117 ATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGA 156176 |||||||| || || ||||| || || ||||| ||||||| || | || ||| | Sbjct 220165 ATACCATTAGAGGTACCATTAGTACCAGCAATATAAGAACCAGTAGATCTAATATTGTTG 220106 Query 156177 ATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT-ACAGTATT 156235 || || | |||||||| || | |||| || || |||| ||| | ||| | Sbjct 220105 ATGTGCAAACCAATACCGCCAGCGTGTTTACTGATAATGGC-CATTTGTTTCAAAGTTTC 220047 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 |||||||| ||||| || |||| | ||| | | || | || ||| | ||| | Sbjct 220046 AAAAATACCATCAATGGAGTCATTCTTCATGGCCACAAGGAAACAAGAAGACATTTGGGC 219987 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 || || |||||||| || | ||| || | |||||| | ||||| || |||||| Sbjct 219986 ATTAGGAGTACCAGCGTTAAACAATGTTGGAGAAGCATGAGTGAAATATTTGAGAGACAT 219927 Query 156356 ATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCT 156415 ||| ||| || ||| | || || || ||||| |||| |||| || || Sbjct 219926 CAAATTGTAAGTTTCCAACACTTTTGGAATATCTTCACCGTGGATACCAATAGCAACTCT 219867 Query 156416 CATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCG 156475 ||| || || || || | || ||| |||| ||||| || | ||| | | Sbjct 219866 CATGACCAAGTGTTGTGGTCTTTCAGCAACTTTACCATTAATTCTCAACAAGTAGGATCT 219807 Query 156476 TTCCAGAGTTTTAAACCCGAAATA 156499 ||||| |||||| || || || || Sbjct 219806 TTCCAAAGTTTTGAAACCAAAGTA 219783 >seq1 Length=4909981 Score = 136 bits (150), Expect = 1e-26 Identities = 319/465 (69%), Gaps = 16/465 (3%) Strand=Plus/Plus Query 133205 GAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTT 133264 |||| | |||| | |||| | || || || |||||||| |||||||||||||| | Sbjct 4056004 GAAAGATATTTCCTCTCTAGAGTGTTGGCTTTCTTTGCTGCTAGTGATGGTATTGTCAAT 4056063 Query 133265 GAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGCC-GAAGCCCGTGCCTTT 133321 ||||| || | ||| || | | || ||||| ||| || || |||||| |||| Sbjct 4056064 GAAAACTTGGTTGAAAACT-TCTCTGCC-GAAGTGCAA-TGTCCAGAAGCCAAATTCTTT 4056120 Query 133322 TATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGAT 133381 ||||| | || ||| |||||||||||| || ||| || || ||| ||||||||| Sbjct 4056121 TATGGTTTCCAAATTATGATGGAAAATATTCACTCTGAAACTTACTCTTTGCTAATTGAT 4056180 Query 133382 ACTTACATCAAAGATACCGTCCAGAAGCACAA--ACTATTCAACGCCATTAGCGAAT-TT 133438 ||||||||||| | ||| |||| | || ||||||| |||||| | | | | Sbjct 4056181 ACTTACATCAAGG--ACCCAAAAGAATCTGAATTTTTATTCAATGCCATT-GAAACTATC 4056237 Query 133439 CCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGT 133498 || |||| |||| ||| | ||||||||| | | ||||||| | || | || Sbjct 4056238 CCATGTA-TAAAGCAAAAGCCGACTGGGCTTTGAGATGGATCAACGATGATGAGGCTTTA 4056296 Query 133499 TTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTC 133558 |||| | | | ||||| ||||||| || || || ||||| ||| |||| | || Sbjct 4056297 TTTGGTGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTC-TTT 4056355 Query 133559 TGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGA 133617 ||| || || || ||| | |||||| | ||| | | || || || ||| || ||||| Sbjct 4056356 TGCTTCCATCTTCTGGTTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGA 4056415 Query 133618 ACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC-GTTT 133661 ||||||||| || || || | | ||||| || |||||| |||| Sbjct 4056416 ACTTATTTCCAGAGATGAAGGTTTGCACACAGACTTTGCCTGTTT 4056460 Score = 89.7 bits (98), Expect = 2e-12 Identities = 215/321 (67%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||||| ||||| ||||| |||| || | | |||| ||||||||| || | Sbjct 4224681 TTTACCAATTGCATCGATTTCATCAACAAATACAATTGCTGGAGCATTTTGTCTAGCGGT 4224740 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 | || || || | || | || || |||| ||| ||| |||| || ||||||||||| Sbjct 4224741 TTTGAACAAGTCACGAACTCTAGAAGCACCAACACCCACAAACATCTCCACAAATTCAGA 4224800 Query 289146 AGCGGATACTTGAATGAA-TGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || || |||| || || ||| ||||| || || ||| | || | | | Sbjct 4224801 ACCAGAAACA-GAATAAAATGGTACTCCAGCTTCACCAGCAGTAGCCTTAGCTAATAAGG 4224859 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 | ||||| || || || || || ||| | | || |||| | || || || || Sbjct 4224860 TTTTACCGGTACCTGGAGGACCAGATAAGATTGCACCTCTTGGAATCTTAGCACC--CAA 4224917 Query 289265 ACTT--ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGC 289322 || |||||| |||| | || ||||||| |||| |||| || ||| | ||| || Sbjct 4224918 TTTTTCATATTTGCCAGGATTTTTCAAAAATTTAACAAATTCCATAATTTCTTCTTTGGC 4224977 Query 289323 CTCATCACATCCTGCTACATC 289343 ||||||||| || |||||||| Sbjct 4224978 CTCATCACAACCAGCTACATC 4224998 >seq5 Length=2406875 Score = 95.1 bits (104), Expect = 4e-14 Identities = 217/324 (67%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 289023 TTTTTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082 || |||||||| |||||||||||| |||| ||||| | |||| ||| |||||| Sbjct 1441547 TTCTTTACCAATAGCATCAATTTCATCAACAAAAATAATTGCAGGAGCCATTTTTCTCGC 1441488 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 | |||||| || | || | || || |||| ||| || ||||||| ||||| || Sbjct 1441487 GCTCTTAAATAAGTCACGAACTCTTGAAGCACCAACACCGGCAAACATTTCCACAAACTC 1441428 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 |||| | || ||| | ||||| ||| ||||| || || ||| |||| | | Sbjct 1441427 AGAACCAGAAACTGACAAGAATGGAACACCAGCTTCACCAGCAGTAGCCTTCGCTAATAA 1441368 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGC 289262 ||| ||||| || || || || || || | | ||| |||| | || || || | Sbjct 1441367 TGTTTTACCAGTACCTGGAGGACCAGACAAAATTGCACCCCTTGGGATCTTAGCTCC--C 1441310 Query 289263 AGACTT---ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTT 289319 | |||| ||| || |||| | || |||||| ||||| |||| | ||| | ||| Sbjct 1441309 A-ACTTTTCATACTTGGCAGGATTTTTCAAAAATGATACAAATTCCATGATTTCTTCTTT 1441251 Query 289320 TGCCTCATCACATCCTGCTACATC 289343 || || ||||| || || ||||| Sbjct 1441250 AGCTTCTTCACAACCAGCAACATC 1441227 Score = 93.3 bits (102), Expect = 1e-13 Identities = 134/186 (72%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 301768 AAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTC-TTCAAT 301826 || || ||||| |||||||| |||| |||| | | | || ||||| || ||| Sbjct 910956 AAGTAGATAGTCAAGGATGGAGTCTTAATGTTCTTTGCCACGTTAAGGATTTCCTTTAAT 910897 Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886 | || |||||| | || ||||| |||||| | |||||||||| | ||||||||||| Sbjct 910896 -CTAGGTACACCAAGAGTAACGTT---CTTGGAAGAAACACCAGCATAATGGAAAGTATT 910841 Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946 || || | || |||| |||||||||||| ||| || |||| | ||| |||||||| Sbjct 910840 CAACGTCATCTGCGTAGCAGGCTCACCAATAGATTGAGCAGCAAGAACACCCACCATTTC 910781 Query 301947 TCCTGG 301952 || || Sbjct 910780 ACCAGG 910775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817467996359