Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 168 6e-37 seq1 131 2e-25 seq4 129 5e-25 >seq3 Length=2682731 Score = 168 bits (186), Expect = 6e-37 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || ||||||| |||| ||||| || ||||| || ||||| ||| || | Sbjct 829808 GATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTC 829749 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| |||||||||||||||||||| || || || ||||| Sbjct 829748 CGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCA 829689 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || ||||| |||| ||| |||| |||| || || || Sbjct 829688 ACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAA 829629 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||| ||||||||||| || | |||||||| ||| ||||| | || || || Sbjct 829628 CATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 829578 >seq1 Length=4909981 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || |||| |||||||| || || | ||||| ||| | | Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| ||||| || || || || ||| Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| ||||| || || || |||| ||| |||| | |||| || || ||| Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||| | || ||||| ||| ||||| | || || Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670 >seq4 Length=2685930 Score = 129 bits (142), Expect = 5e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 24717 TTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAA 24776 ||||||| | || |||||||| ||||| | ||||| ||| | ||||||| | || | Sbjct 2595162 TTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACA 2595103 Query 24777 CGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCT 24836 || ||| ||||| |||||||||||||| || || || || |||||| | ||||||| Sbjct 2595102 ATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCT 2595043 Query 24837 TTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAAT 24896 |||| || ||||| |||| ||| |||| | | || || || || || ||||| |||| Sbjct 2595042 TTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAAGAAT 2594983 Query 24897 CGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || | || ||||| ||| ||||| | || || Sbjct 2594982 CTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897560633960