Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3 122 7e-23 seq1 114 1e-20 seq4 102 7e-17 >seq3 Length=2682731 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||| || ||||| ||||| || || ||||||||| | ||| || | Sbjct 829810 AAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCC 829751 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| ||| | | | | || ||| ||||| || |||||||| | || ||| Sbjct 829750 TCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 829691 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| |||||||| |||| || | | ||| || | |||||| Sbjct 829690 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 829631 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| || || |||||| |||| ||||||||| |||| || Sbjct 829630 AACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 829581 >seq1 Length=4909981 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||||||||| ||||| || ||||| || |||||||| || | ||| || || Sbjct 2136125 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTC 2136066 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | | || || |||||| || || ||||| | || || || Sbjct 2136065 TGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 2136006 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 || ||| | |||| ||| ||||| ||| |||| || | || ||| || | |||||||| Sbjct 2136005 ACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTACAA 2135946 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| ||||| || || || |||||| |||| ||||||||| |||| || Sbjct 2135945 CATCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2135898 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || ||||| || |||||||| || | ||| || || Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || || |||||| || || ||||| | || || || Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| ||||| || |||| || | || ||| || | ||||||||| Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| || || || ||||| |||| ||||||||| |||| || Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670 >seq4 Length=2685930 Score = 102 bits (112), Expect = 7e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623 ||| || |||||||| || || |||||||||||| | ||| || || ||| || | Sbjct 2595167 TTTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCAT 2595108 Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683 | | | || ||| |||||| || |||||||| | || || || || ||| | Sbjct 2595107 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 2595048 Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743 || | ||| |||||||| |||| || | || ||| | | |||||||| || ||||| Sbjct 2595047 GATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAA 2594988 Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || ||||| ||||| |||| ||||||||| |||| || Sbjct 2594987 AGAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876765970823