Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 4e-29
seq4 134 2e-26
seq1 127 3e-24
>seq3
Length=2682731
Score = 143 bits (158), Expect = 4e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| ||||| || || || ||||| |||| || ||| ||
Sbjct 829806 TGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTCCG 829747
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| ||| || || ||| |||||||| |||||||| |||||||
Sbjct 829746 ACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAAC 829687
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| ||||||||||| || ||| |||||| || | || || || |
Sbjct 829686 AAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACA 829627
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||| ||||| || | || || || || |||| ||||| |||
Sbjct 829626 TCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGGT 829580
>seq4
Length=2685930
Score = 134 bits (148), Expect = 2e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 146040 TTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATT 146099
||| | ||||| || || || ||||| ||||| | || || ||| | ||| || |||
Sbjct 2595166 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2595107
Query 146100 CAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTC 146159
| ||||| ||| || || ||| |||||||| |||||||| || ||||||||| |
Sbjct 2595106 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 2595047
Query 146160 ATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAA 146219
|| ||||| ||||||||||| || ||| ||||| | | || || ||||| ||||||
Sbjct 2595046 ATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAA 2594987
Query 146220 GAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
||||| ||| | ||||| || || |||| ||||| |||
Sbjct 2594986 GAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGGT 2594948
>seq1
Length=4909981
Score = 127 bits (140), Expect = 3e-24
Identities = 169/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||| || ||||| || ||| | || || ||| | |
Sbjct 2135895 TGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTG 2135836
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || || || ||| || ||||| |||||||| || ||||
Sbjct 2135835 ACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 2135776
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | |||||||| ||||| ||||| || ||| ||||| || | || || || |
Sbjct 2135775 AAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACA 2135716
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAAT 146266
| ||||||||||| || | ||||| || || |||| ||||| ||| |||||
Sbjct 2135715 TTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGGTTGCTAAAT 2135661
Score = 123 bits (136), Expect = 4e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || ||||| || ||||| || ||| | || || ||| | |
Sbjct 2136123 TGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTG 2136064
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| || || || ||| || ||||| |||||||| || ||||
Sbjct 2136063 ACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAAC 2136004
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | |||||||| ||||| || || || ||| ||||| || | || || || |
Sbjct 2136003 AAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTACAACA 2135944
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || | || || || || |||| ||||| ||||
Sbjct 2135943 TCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGGTA 2135896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786166331210440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |