Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2 208 2e-48 seq1 156 1e-32 >seq2 Length=4155432 Score = 208 bits (230), Expect = 2e-48 Identities = 568/865 (66%), Gaps = 11/865 (1%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 |||| ||||||||||||||| | ||| | | || || | | | ||||| | | Sbjct 219781 ACTACTTTGGTTTCAAAACTTTGGAAAGATCCTACTTGTTGAGAATTAATGGTAAAGTTG 219840 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATT- 110420 |||| | || |||||| || | | | ||||| |||||||| || || | |||||| Sbjct 219841 CTGAAAGACCACAACACTTGGTCATGAGAGTTGCTATTGGTATCCACGGTGAAGATATTC 219900 Query 110421 -AAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCC 110479 ||| |||| ||| ||| || | | | || | | ||||||| |||| Sbjct 219901 CAAAAGTGTTG--GAAACTTACAATTTGATGTCTCTCAAATATTTCACTCATGCTTCTCC 219958 Query 110480 TACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAAT 110539 || | |||||||| || ||| | | ||| || ||||||| || ||| | | || Sbjct 219959 AACATTGTTTAACGCTGGTACTCCTAATGCCCAAATGTCTTCTTGTTTCCTTGTGGCCAT 220018 Query 110540 TAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAA 110599 || |||| || ||||| ||||||| ||| || | ||| ||| || |||| ||| Sbjct 220019 GAAGAATGACTCCATTGATGGTATTTTTGAAACTTTGAAACAAATGGCCATTATCAGTAA 220078 Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 | || |||| || |||||| | ||| | | ||||| | || | || | |||| || Sbjct 220079 ACACGCTGGCGGTATTGGTTTGCACATCAACAATATTAGATCTACTGGTTCTTATATTGC 220138 Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719 | || ||| | || | ||| || |||||||||| ||||| |||||| |||| || Sbjct 220139 TGGTACTAATGGTACCTCTAATGGTATTATTCCAATGTTGAGAGTTTTCAACAACACCGC 220198 Query 110720 AAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776 | |||||| ||||||||||| || ||| ||| | ||||| || ||| | ||||| Sbjct 220199 CAGATATGTTGATCAAGGTGGTAACAAAAGACCTGGTGCCTTTGCCATATATGTTGAACC 220258 Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836 ||||| |||||||| ||||| ||| | || | | || ||||| || |||||| Sbjct 220259 ATGGCACTCAGATATCTTTGATTTCATTGATATCAGAAAGAATCATGGTAAAGAAGAAAT 220318 Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896 || || | |||||||| || | ||||| || || ||||| ||||| | ||| | Sbjct 220319 CAGGGCCAGAGATTTATTCCCAGCTTTATGGATCTCCGACTTATTTATGAAGAGAGTTGA 220378 Query 110897 AGAAAATGGCATG--TGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTA 110954 | | || || | ||| | | | | ||| || || ||| | |||| Sbjct 220379 AAAGAA--CCAAGACTGGACCTTGTTTTCCCCTAATGAAGCTGAAGGTTTGGCTGACACT 220436 Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA 111014 ||||| |||| || |||| |||||| || |||||||||| |||||||| | | | | Sbjct 220437 TATGGTGAAGAATTCGAAGCCCTTTATGAGAAATATGAAAGAGAAGGCAGAGGTAGAAGA 220496 Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074 || || ||| | | |||| || || | ||| | ||| ||||||||| ||| Sbjct 220497 ACCGTTAAGGCCCAAAAGTTGTGGTACAGCATTTTGGAAGCTCAAACTGAAACTGGTACT 220556 Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134 || | || |||||||||||| | |||| ||||| || |||| |||| | || Sbjct 220557 CCATTCATGTTGTATAAAGATGCTTGTAATGCTAAATCCAACCAAAAGAATCTTGGTCTT 220616 Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159 || || ||| || ||||| |||| Sbjct 220617 ATCAAATCTTCCAACTTGTGTTGTG 220641 Score = 102 bits (112), Expect = 2e-16 Identities = 134/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 ||||| | ||||| |||| || |||| ||||| || |||||| |||||| | | Sbjct 2283157 AGACACATTAATGATGGTGATATTGTGTTGTTTAATAGACAGCCATCATTGCATAGATTA 2283098 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATC--TGGATTGACATTTCGATTAAATGTAA 305423 ||||| || | ||| | | |||| | | | | |||| || ||| |||| |||| Sbjct 2283097 TCTATTTTGTCGCATTACGCCAAAAT-TAAGCCTTGGAGA-ACTTTTAGATTCAATGAGT 2283040 Query 305424 GTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483 ||| ||||||||| |||||||| ||||||||||| |||||||||||| |||| || || | Sbjct 2283039 GTGTTTGTACGCCATATAATGCCGATTTTGATGGTGATGAAATGAATTTGCACGTTCCAC 2282980 Query 305484 AA 305485 || Sbjct 2282979 AA 2282978 >seq1 Length=4909981 Score = 156 bits (172), Expect = 1e-32 Identities = 289/419 (69%), Gaps = 4/419 (1%) Strand=Plus/Minus Query 131765 TTATTTGATGCTGTAAATAAATTTCC-TGCAATTAAAAAGAAAGCAGAATGGGCTATTAA 131823 |||||| |||| | ||| | |||| |||| ||||| | |||||||| ||||| ||| Sbjct 3917988 TTATTTAATGCAATTGATACAATTCCATGCA-TTAAAGAAAAAGCAGACTGGGCGCTTAG 3917930 Query 131824 ATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGA 131883 ||||||| ||||||| |||| ||| || |||| | ||||| |||||| ||||| Sbjct 3917929 ATGGATTGAAGATGAAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGA 3917870 Query 131884 AGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGAT 131943 ||||||||| ||||| ||| ||||| | | || |||||||| ||||| | || | || Sbjct 3917869 AGGTATATTTTTTTCCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTAT 3917810 Query 131944 GCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATT 132003 ||| || || | || |||||| | || || | | ||||||| | |||||||| || Sbjct 3917809 GCCCGGTCTTACTTTCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACTGATTT 3917750 Query 132004 TGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATA-TTAAACAAC 132062 ||| ||| | ||| | || | | |||| ||||| | | |||| || | || Sbjct 3917749 TGCCTGTTTATTGTATTCGCATTTGGAAAACAAACCTGATGCAGA-AATAGTTGATAAAA 3917691 Query 132063 TTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATT 132122 | |||| || || ||||| || || ||| | | || ||||| || || || Sbjct 3917690 TAATAACAGAGGCGGTTGAAATTGAAAAGCGTTATTTTGACGAAGCATTATCTGTTTCTT 3917631 Query 132123 TGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTA 132181 || |||| ||||| ||| | ||||| ||||| |||| || || |||||| | ||| Sbjct 3917630 TGCTTGGAATGAACGCTTCATTGATGAATCAGTACGTTGAGTTTGTGGCTGATAGATTA 3917572 Score = 129 bits (142), Expect = 1e-24 Identities = 362/549 (66%), Gaps = 9/549 (2%) Strand=Plus/Minus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 ||||| ||||| ||| || | || ||||||| |||||| || || ||| |||||| Sbjct 4605279 ATGTACAAGAAGGCTGAAGCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGAT 4605220 Query 131525 ATTGATGATTGGGAAAA---ATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTT 131581 | | || ||| | || ||| | ||||||| | |||| |||||| ||| | Sbjct 4605219 TTGCACGACTGGAACAACAGATTGAATGCTAATGAAAGATATTTCATTTCCAGAGTCTTG 4605160 Query 131582 GCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAA 131641 |||||||| || | ||||| || || |||| ||||| | ||| || ||| | Sbjct 4605159 GCATTCTTTGCTGCTAGTGACGGTATCGTTAACGAAAACTTGGTTGAAAACTTCTCTGCC 4605100 Query 131642 GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATT 131701 ||| || | ||| |||| | || |||||| || ||| | | ||| || Sbjct 4605099 GAAGTTCAATGTCCAGAAGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATA 4605040 Query 131702 CATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGA-TAAAAA 131760 ||| || | ||||| || |||||||| | | | |||| || | | || | || Sbjct 4605039 CATTCTGAAACTTATTCTTTGTTGATTGATACTTATATTAAGGATCCAAAAGAATCTGAA 4604980 Query 131761 TAAATTATTTGATGCTGTAAATAAATTTCC--TGCAATTAAAAAGAAAGCAGAATGGGCT 131818 | || ||| ||||| | | || | ||| || | |||| || ||||| || ||||| Sbjct 4604979 TTC-TTGTTTAATGCTATTGA-AACTATCCCATGTA-TTAAGAAAAAAGCTGACTGGGCA 4604923 Query 131819 ATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGT 131878 | | |||||| | ||||| ||| ||| |||| | || || |||||| | Sbjct 4604922 TTGAGATGGATCAATGATGACCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCT 4604863 Query 131879 GTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGA 131938 ||||||||||| ||||| || ||| |||| | ||||||||||| | || ||| | || Sbjct 4604862 GTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGT 4604803 Query 131939 TTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACT 131998 ||||||| || | | || || ||| |||| || | |||||||||| |||||||| Sbjct 4604802 ATGATGCCAGGTTTAACCTTCTCTAATGAATTGATTTGCAGAGATGAAGGTTTGCATACC 4604743 Query 131999 GAATTTGCT 132007 || || ||| Sbjct 4604742 GACTTCGCT 4604734 Score = 105 bits (116), Expect = 2e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 131804 AAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTT 131863 ||||| || |||||| | | |||||| | |||||| ||| ||| | |||| | Sbjct 4056252 AAAGCCGACTGGGCTTTGAGATGGATCAACGATGATGAGGCTTTATTTGGTGAAAGATTG 4056311 Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||| |||||||||||| ||||| || ||| |||| | | ||||| ||| Sbjct 4056312 GTTGCCTTTGCTGCTGTTGAAGGTATTTTCTTCTCTGGTTCTTTTGCTTCCATCTTCTGG 4056371 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 | || ||| | || |||||||| || | | || ||||| || | || || |||||| Sbjct 4056372 TTGAAAAAGAGGGGTTTGATGCCAGGGTTGACTTTCTCCAACGAACTTATTTCCAGAGAT 4056431 Query 131984 GAAGCATTGCATACTGAATTTGC 132006 |||| ||||| || || ||||| Sbjct 4056432 GAAGGTTTGCACACAGACTTTGC 4056454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812693557727