Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 131 4e-25 seq4 102 2e-16 seq3 86.0 1e-11 >seq1 Length=4909981 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| |||||||||||||| ||| ||||||||| | || || ||| Sbjct 2136100 ACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 2136041 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| ||| || ||| |||||| | || || || || ||| Sbjct 2136040 AAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTTGCTGGTAAG 2135981 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||||||||| || || ||| | || |||||| |||| ||||| || || | ||| Sbjct 2135980 CAGTTGGAAGATGGCAGAACCTTGTCTGACTACAACATCCAAAAAGAATCCACATTGCAC 2135921 Query 206374 CTTGTTTTGAGA 206385 | ||||||||| Sbjct 2135920 TTGGTTTTGAGA 2135909 Score = 118 bits (130), Expect = 3e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || || ||||| |||||||||||||| ||| ||||||| Sbjct 2135893 CAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTGAC 2135834 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||||||||| || ||||| ||| || ||| ||| Sbjct 2135833 ACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 2135774 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || || ||||| ||||||||||| || || ||| | || |||||| | Sbjct 2135773 AGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAACATT 2135714 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||||| || || | || | ||||||||| Sbjct 2135713 CAAAAAGAATCCACATTGCATTTGGTTTTGAGA 2135681 >seq4 Length=2685930 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| || || |||||||| ||| ||| ||||| | || Sbjct 2595160 AAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAAT 2595101 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || || ||||||||||| |||||||| ||| || ||| |||||| | ||||| Sbjct 2595100 GTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTT 2595041 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || ||||||||||| || || | | || ||||| |||| ||||| ||| Sbjct 2595040 GCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAAGAATCT 2594981 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 ||| | || | || |||||| Sbjct 2594980 ACTTTGCATTTGGTCTTGAGA 2594960 >seq3 Length=2682731 Score = 86.0 bits (94), Expect = 1e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| |||||||| ||| || || |||||| | ||||| || || || Sbjct 829723 AAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAAAGATTGATCTTTGCTGGTAAA 829664 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| || |||||| | || |||||| |||| || || || || | ||| Sbjct 829663 CAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATCCAAAAGGAATCCACCTTGCAC 829604 Query 206374 CTTGTTTTGAGA 206385 | || |||||| Sbjct 829603 TTGGTCTTGAGA 829592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820694005447