Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 seq4 107 2e-18 seq1 95.1 1e-14 >seq3 Length=2682731 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||||||||| |||||||| || || || |||||||||||| | ||| ||| || Sbjct 829810 AAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCC 829751 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 ||| || ||| | | || ||| || || ||||||||||| | || |||| Sbjct 829750 TCCGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGAT 829691 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | ||| || |||||||| |||||| || |||| || || ||| Sbjct 829690 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 829631 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| ||||| || | || || || ||||| || |||| || Sbjct 829630 AACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 829581 >seq4 Length=2685930 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327 ||| |||||||| |||||||| || ||||||||| ||||| ||| | ||| | | Sbjct 2595167 TTTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCAT 2595108 Query 106328 TGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCT 106387 || | | || ||| || ||| ||||||||||| | || ||| |||||||| | Sbjct 2595107 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 2595048 Query 106388 TATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAA 106447 || | ||| || |||||||| |||||| | ||| | || ||||| || ||||| Sbjct 2595047 GATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAA 2594988 Query 106448 AGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||||||| | ||||| || ||||| || |||| || Sbjct 2594987 AGAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949 >seq1 Length=4909981 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| || || || ||||| || ||||| || ||||| ||| | Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || || || ||| ||||| ||||| | || || ||| Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| ||| || || ||||| |||||| | ||| || || |||||| Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||||||||| ||| | ||||| || ||||| || |||| || Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||| || || || || ||||| || ||||| || ||||| ||| | Sbjct 2136125 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTC 2136066 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || || ||| | | || || || ||| ||||| ||||| | || || || Sbjct 2136065 TGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCA 2136006 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 |||||| | |||| ||| || || || || |||||| | ||| || || ||||| Sbjct 2136005 ACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTACAA 2135946 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||| ||||||||||| ||| | || || || ||||| || |||| || Sbjct 2135945 CATCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2135898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329565676256