Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 259 4e-64 seq3 91.5 1e-13 >seq1 Length=4909981 Score = 259 bits (286), Expect = 4e-64 Identities = 423/602 (70%), Gaps = 18/602 (3%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || |||||| || | ||||| | |||||||| || |||||||||||||| || || | Sbjct 4605321 AGATTTGTCTTGATGCCAATCAAGTATCATGAAATCTGGCAAATGTACAAGAAGGCTGAA 4605262 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815 || || |||||||| || |||||| |||| |||| |||||| || |||| | |||| Sbjct 4605261 GCCTCTTTTTGGACTGCTGAAGAAATTGACTTGAGTAAAGATTT-GCACGACTGGAACAA 4605203 Query 43816 ---ATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 ||| || | | |||| | |||| || || || ||||| || |||||||| || Sbjct 4605202 CAGATTGAATGCTAATGAAAGATATTTCATTTCCAGAGTCTTGGCATTCTTTGCTGCTAG 4605143 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932 ||||| || || || ||||| |||||| || | |||||||||| ||||| Sbjct 4605142 TGACGGTATCGTTAACGAAAACTTGGTTGAAAACTTCTCTGCCGAAGTTCAATGTCCAGA 4605083 Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAG 43992 ||| |||||| || || || ||||| || ||||| || ||||| |||| || Sbjct 4605082 AGCCAAATGTTTCTACGGTTTCCAAATCATGATGGAAAACATACATTCTGAAACTTATTC 4605023 Query 43993 TCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATC-GA----TTGTTTAAT 44047 | | |||| ||||| || || || ||| | | ||| ||| || ||||||||| Sbjct 4605022 TTTGTTGATTGATACTTATATTAAGGAT-----CCAAAAGAATCTGAATTCTTGTTTAAT 4604968 Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT 44107 || || ||||| | || ||||| | ||||| |||||||| | | |||||| ||| Sbjct 4604967 GCTATTGAAACTATCCCATGTATTAAGAAAAAAGCTGACTGGGCATTGAGATGGATCAAT 4604908 Query 44108 --TCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTC 44164 | | | | || ||||| ||| || | || || ||||| | ||| ||||| |||||| Sbjct 4604907 GATGACCAAGCTTTGTTTGGCGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTC 4604848 Query 44165 TTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTG 44224 || || || || ||||| | || ||||||||||| || ||||| ||||||| || || Sbjct 4604847 TTCTCTGGTTCTTTTGCTTCTATCTTTTGGTTAAAAAAGAGAGGTATGATGCCAGGTTTA 4604788 Query 44225 ACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || || ||||| || || | | |||||||| || ||| ||| || ||||||||| Sbjct 4604787 ACCTTCTCTAATGAATTGATTTGCAGAGATGAAGGTTTGCATACCGACTTCGCTTGCTTG 4604728 Query 44285 TT 44286 || Sbjct 4604727 TT 4604726 Score = 237 bits (262), Expect = 1e-57 Identities = 419/602 (70%), Gaps = 19/602 (3%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||| || | ||||| |||||||||| ||||||||||||||||| || || | Sbjct 4055869 AGATTTGTTTTGATGCCAATCAAATATCATGAAATATGGCAAATGTACAAGAAGGCTGAA 4055928 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTG- 43814 || ||||| ||||| || ||||| | || |||| |||||| | ||| | |||| || Sbjct 4055929 GCTTCATTCTGGACTGCTGAAGAGATCGACTTGAGTAAAGATAT-GCATGACTGGAATGA 4055987 Query 43815 CA--TTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 || || || | | |||| | |||| | ||| || ||||| || |||||||| || Sbjct 4055988 CAAGTTGAATGCCAACGAAAGATATTTCCTCTCTAGAGTGTTGGCTTTCTTTGCTGCTAG 4056047 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGA 43932 || || || ||||||||||| |||||| || | ||||| |||| ||||| Sbjct 4056048 TGATGGTATTGTCAATGAAAACTTGGTTGAAAACTTCTCTGCCGAAGTGCAATGTCCAGA 4056107 Query 43933 AGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAG 43992 ||| || |||||||| || |||||| || ||||||||||| || |||| ||| Sbjct 4056108 AGCCAAATTCTTTTATGGTTTCCAAATTATGATGGAAAATATTCACTCTGAAACTTACTC 4056167 Query 43993 TCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATC-GATTGTTTA----AT 44047 | | || || ||||| |||||||| || | | ||| ||| || | |||| || Sbjct 4056168 TTTGCTAATTGATACTTACATCAAGGAC-----CCAAAAGAATCTGAATTTTTATTCAAT 4056222 Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT 44107 || || ||||| | || || || || ||||| |||||||| | | |||||| || Sbjct 4056223 GCCATTGAAACTATCCCATGTATAAAGCA-AAAGCCGACTGGGCTTTGAGATGGATCAAC 4056281 Query 44108 TCAAATGATTCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTC 44164 |||| |||| ||| ||| || | || || ||||| | ||| ||||| |||||| Sbjct 4056282 GATGATGAGGCTTTATTTGGTGAAAGATTGGTTGCCTTTGCTGCTGTTGAAGGTATTTTC 4056341 Query 44165 TTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTG 44224 || || || || ||||| |||| || ||||| || || | ||||||||||| |||||| Sbjct 4056342 TTCTCTGGTTCTTTTGCTTCCATCTTCTGGTTGAAAAAGAGGGGTTTGATGCCAGGGTTG 4056401 Query 44225 ACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || || || || | || | |||||||| || || || ||||| || ||| Sbjct 4056402 ACTTTCTCCAACGAACTTATTTCCAGAGATGAAGGTTTGCACACAGACTTTGCCTGTTTG 4056461 Query 44285 TT 44286 || Sbjct 4056462 TT 4056463 Score = 203 bits (224), Expect = 3e-47 Identities = 583/873 (67%), Gaps = 33/873 (4%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| | ||||| || | || ||||| |||||||||||||||||||||||| | || Sbjct 3918330 TTTGTATTATTTCCCATAAAGTACCATGAAATATGGCAAATGTACAAAAAAGCAGAAGCT 3918271 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGA--TTGCA 43816 || || ||||| || || ||| ||||| | ||| || || ||| |||||| | | Sbjct 3918270 TCTTTCTGGACCGCCGAGGAAATTGATCTTGGTAAGGATTT-GCATGATTGGAACTATAA 3918212 Query 43817 TTAAAACCACAAGAAAAACATTTT-ATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875 | || ||| || | |||| || || || | || |||||||| || || Sbjct 3918211 GTTGAATAGCAATGAACAGTTTTTCATTTCCAGAGTGCTAGCATTTTTTGCCGCATCGGA 3918152 Query 43876 CGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCAGAA 43933 || || || ||||| ||| | || | || | | | |||| || | || ||| Sbjct 3918151 TGGCATCGTTAATGAGAATCTTGTACA--GAATTTCTCTACCCAAGTACAGATTCCCGAA 3918094 Query 43934 GCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGT 43993 || ||| |||||||| |||||||| || || ||| ||||||| || | ||| | Sbjct 3918093 GCCAAATGCTTTTATGGTTTTCAAATAATGATGGAGAATGTTCATTCAGAGACATACTCT 3918034 Query 43994 CTTCTGATAGATACGTACATCAAAGATGG-GCACGAGAAGCATCGATTGTTTAATGCGAT 44052 || |||||||||| || || ||| | || | | || || |||||||| || Sbjct 3918033 CTGTTGATAGATACTTATATTCTGGATCCTGAACAGGCCGAATTT-TTATTTAATGCAAT 3917975 Query 44053 AGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATT 44108 || ||| | || ||| |||||| | |||||||||||||| |||| |||||| | || Sbjct 3917974 TGATACAATTCCATGC-ATTAAAGAAAAAGCAGACTGGGCGCTTAGATGGATTGAAGATG 3917916 Query 44109 CAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168 | | | || |||| ||| || | || || ||||| | || ||||| || || |||| Sbjct 3917915 AAGACGCTTTATTTGCTGAAAGATTAGTAGCATTTGCTGCCGTTGAAGGTATATTTTTTT 3917856 Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228 | || || || || | ||||||||| | |||||| ||||| | ||||| || | || | Sbjct 3917855 CCGGTTCTTTCGCTTCGATATTTTGGCTCAAGAAAAGAGGTCTTATGCCCGGTCTTACTT 3917796 Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGT--T 44286 | || |||||||| || |||| |||||||| | ||| |||||||| || || | | Sbjct 3917795 TCTCCAATGAGTTGATTTGTCGCGATGAAGGTCTTCATACTGATTTTGCCTGTTTATTGT 3917736 Query 44287 ACTTGGATATCTAGGAGACGATAAGCCTTCATGTA-AGACAATTACAGATATTGTTGTAG 44345 | | | || | ||| | | || || | ||| | | | | || | || | || Sbjct 3917735 ATTCGCAT---TTGGAAA--ACAAACC-TGATGCAGAAATAGTTGATAAAATAATAACAG 3917682 Query 44346 AGGCAGTAAAGATAGAACAAGAAT--TTATGACAACAGCATTACCTGTAAATTTAATAGG 44403 |||| || | || ||| ||| | || |||| | ||||||| |||| ||| | || Sbjct 3917681 AGGCGGTTGAAATTGAA-AAGCGTTATTTTGACGA-AGCATTATCTGTTTCTTTGCTTGG 3917624 Query 44404 AATGAATGAACTT--TTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTG 44461 |||||| | ||| |||||||| || || |||| | | || ||| | ||| | | Sbjct 3917623 AATGAACG--CTTCATTGATGAATCAGTACGTTGAGTTTGTGGCTGATAGATTATTGATT 3917566 Query 44462 GAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATT 44521 |||| | | || ||| | ||| || || ||||||||||||||||| ||| Sbjct 3917565 TCTTTGGGCAGAAAAAAGATCTACAATGTTACTAATCCATTTGATTTTATGGAAAACATT 3917506 Query 44522 TCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 || |||| ||| ||||| || || ||||| ||| Sbjct 3917505 TCATTGGCAGGGAAAACTAATTTCTTTGAGAAA 3917473 >seq3 Length=2682731 Score = 91.5 bits (100), Expect = 1e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 115035 GTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTCGGCT 115094 |||||||| || |||| ||||||||||||||||| ||| ||||| || | ||| || || Sbjct 1482731 GTCATACGAGATGGAATAGCATGCGGATTAATAACCAAATCTGGAACCACCCCTTCTGCA 1482672 Query 115095 GTGAACGGCATGTCGTGCTGATCGTACATCATTCCACAAGTTCCTTTTTGAGCG-GTAAA 115153 || || ||||| || | || || | || ||| ||| ||||||||| || || | Sbjct 1482671 GTAAATGGCATATCTTCATGTCTATAAGTGATACCAATAGTACCTTTTTGACCGTGTCTA 1482612 Query 115154 CGATGCAAATTTATCACCAATCTCAGGTTCTCTGATTTTTCTCA 115197 || |||||||| |||||||| | || || || | |||||| Sbjct 1482611 -GAGGCAAATTTGTCACCAATTTGTGGCACTTTGGTGGTTCTCA 1482569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455966092035