Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 251 9e-62 seq1 89.7 6e-13 >seq2 Length=4155432 Score = 251 bits (278), Expect = 9e-62 Identities = 1118/1749 (64%), Gaps = 45/1749 (3%) Strand=Plus/Minus Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427 ||||||||| |||||||| | |||| ||||| |||| | ||||||||||| | || Sbjct 221573 ATAGTACATACCGGTCTTCAAACCTTTCTTCCAACCGTAGAAATGCATAGAAGTCAATTT 221514 Query 110428 GGACATCGTTGGA--CTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGC 110485 ||| ||||| ||| |||| | ||||| |||| ||| |||||||| | Sbjct 221513 ACCCATAGTTGGGTCCTTGATGTGAATA--TTCATGGATTGAGATTGATCAATGAATGGA 221456 Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545 | | | || |||| |||||| | | ||| ||| |||||||| || || Sbjct 221455 GCTCTATCAGCAGCCAAATCAATAATTTTCTTTTGAGAAATCTCCCAAACAGTTTTGTAC 221396 Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605 | || || | || | || || | || | || || || ||||| || | | Sbjct 221395 AAATCTTTCAATTCTTGAGGAATGTTTGGTAAGTTTTGAATAGAACCATTAGCACTAATG 221336 Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665 || |||||||||| | ||||| | ||| || | | || || | | || Sbjct 221335 ATATGATCCTTCATTGAAGTAGACCATAAACCCATGTCAACCAAATCTTTTAACAAGTAT 221276 Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725 ||| || || ||| || || || || |||||| || ||||| | |||||| Sbjct 221275 GGGTTAACGATTTGAAATTCGCCAGCAAGAACTCTTCTGGAATAAATGTTAGAAGTGTAT 221216 Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785 |||||||| |||||||| | |||||| ||||| | || || || ||||||||||| || Sbjct 221215 GGTTCAAAACATTCATTGTAACCCAAAATTTGGGAAGTAGAAGCAGTTGGCATTGGAGCA 221156 Query 110786 ATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845 | ||| | | ||| | | ||| | || ||||| || || | | ||||| || Sbjct 221155 ACCAACAAAGAGTTTCTCAAACCATGCTTCTTGACTTTTTGTTTAACTTCGTCCCAATCC 221096 Query 110846 --TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903 || | || ||||||| || |||| ||| |||| | | || ||||| || || | Sbjct 221095 CATAAGTCAG-TTGGTTTAACATTCC-ACAAGTCATAGGACAACAAACCTTGAGAAGCTG 221038 Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 110963 ||||||| | | |||||||| | ||||| | |||| || ||| | ||||| | Sbjct 221037 GAGAACCTTGGTAAGTTTCATAAGTACCTTCAACAGCAGCTAACTCAGTGGAAGCCTCAA 220978 Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 111023 | || ||||| || |||||||| || ||||||||| | ||| || || || | Sbjct 220977 TAGCAGCATGATAAATAGTTTCAAAAATTTGAGCATTCAATTGCTTAGCCTCTGGAGATT 220918 Query 111024 CAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 111083 |||||| | | ||| || || ||||| || | |||||| ||||| | | |||||| Sbjct 220917 CAAATGGCAATCTCAACATCATGAAAACATCAGCCAAACCTTGGACACCAACAGCAATAG 220858 Query 111084 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAATTTCTGTCAATG 111142 ||||||||| || ||||| ||| || ||| || ||||| || ||||||||||| Sbjct 220857 GTCTGTGTCTCAAGTTAGATCTTCTAGCT-TCTGGGACTGGATAGAAGTTTCTGTCAATA 220799 Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 111202 | ||| | || ||||| |||| || | ||| ||||| | || ||| | | | || Sbjct 220798 ATCTTGTTCAAGTTCTTGGTCACAACTTTAGAGATATCATGCAACTTATCAAAGTTATAA 220739 Query 111203 GTGCGAGTCTCTTCATTGACATACTT---------TGGAAGGGCGATTGATGCCAAATTG 111253 || || ||||||| |||| | ||| | || | || ||||| || Sbjct 220738 GTAGCAGATTCTTCAT---CATATTCAACGAAAGCTGGTAATGCAACAGAAGCCAAGTTA 220682 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 |||||||| || |||| | ||||| || || | |||||| ||| ||||||||| Sbjct 220681 CAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCACAACACAAGTTGGAAGAT 220622 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || || || | |||||||||||| || || || ||||| || || | |||| Sbjct 220621 TTGATAAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAGCATCTTTATACAACATG 220562 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGG 111432 | || || || || || || || | || | ||| | ||| ||| | | | || Sbjct 220561 AATGGAGTACCAGTTTCAGTTTGAGCTTCCAAAATGCTGTACCACAACTTTTGGGCCT-- 220504 Query 111433 TACAATGG--CGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACTC 111489 || || | | || | ||| | | || || || || |||||||| || || Sbjct 220503 --TAACGGTTCTTCTACCTCTGCCTTCTCTTTCATATTTCTCATAAAGGGCTTCGAATTC 220446 Query 111490 CTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACC 111549 ||||| | ||| | | |||| || | | || | || | | ||| | | Sbjct 220445 TTCACCATAAGTGTCAGCCAAACCTTCAGCTTCATTAGGGGAAAACAAGGTCCA--GTCT 220388 Query 111550 ACCTTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 111607 ||| ||||| | |||||| || | ||| | ||||| | | || || | |||| Sbjct 220387 TGGTTCTTTTCAACTCTCTTCATAAATAAGTCGGAGATCCATAAAGCTGGGAATAAATCT 220328 Query 111608 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 || || ||||| | ||| || || || | |||| ||| || | |||||| Sbjct 220327 CTGGCCCTGATTTCTTCTTTACCATGATTCTTTCTGATATCAATGAAATCAAAGATATCT 220268 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 111723 | ||||||||| |||| ||| | || | | || |||| | ||| |||||| Sbjct 220267 GAGTGCCATGGTTCAACATATATGGCAAAGGCACCAGGTCTTTTG-TTACCACCTTGATC 220209 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 ||||| | || ||| ||| || || | | ||||||||||||||||| || ||| Sbjct 220208 AACATATCTGGCGGTGTTGTTGAAAACTCTCAACATTGGAATAATACCATTAGAGGTACC 220149 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 ||| || || |||| ||| | | | ||| | || | |||||||| |||||||| Sbjct 220148 ATTAGTACCAGCAATATAAGAACCAGTAGATCTAATATTGTTGATGTGCAAACCAATACC 220089 Query 111844 CCCAGCCCACTT--TGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 111901 ||||| || ||| | | || || | | | |||| || | ||||| | || Sbjct 220088 GCCAGCGTGTTTACTGATAATGGC-CA-TTTGTTTCAAAGTTTCAAAAATACCATCAATG 220031 Query 111902 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 111961 ||||| | ||| |||| | |||||| ||| ||||| || | | || |||||||| Sbjct 220030 GAGTCATTCTTCATGGCCACAAGGAAACAAGAAGACATTTGGGCATTAGGAGTACCAGCG 219971 Query 111962 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTC 112020 || || | ||||| | || ||| |||| ||| | | |||||| | ||| || || Sbjct 219970 TTAAACAATGTTGGAGAAGCATGAGTGAA-ATATTTGAGAGACATCAAATTGTAAGTTTC 219912 Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTG 112080 ||| || ||| ||||| |||||||| || || || || | ||||| || || || Sbjct 219911 CAACACTTTTGGAATATCTTCACCGTGGATACCAATAGCAACTCTCATGACCAAGTGTTG 219852 Query 112081 TGGGGTTTC 112089 ||| |||| Sbjct 219851 TGGTCTTTC 219843 >seq1 Length=4909981 Score = 89.7 bits (98), Expect = 6e-13 Identities = 171/247 (69%), Gaps = 9/247 (4%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| | ||| ||||||| |||||||||||| || ||||| | || Sbjct 4056455 GGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCC 4056396 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGA 122776 |||||| | ||||| ||| |||||||| | || | ||| || || || |||||||| | Sbjct 4056395 TGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCA-AAAGAACCAGAGAAGAAAA 4056337 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC-- 122834 |||| || ||| ||||| |||| | | ||| | || | || || |||| Sbjct 4056336 TACCTTCAACAGCAGCAAAGGCAACCAATCTTTCACCAAATAA---AGCCTCATCATCGT 4056280 Query 122835 -AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTT 122893 | |||| ||| ||||| ||| ||| | || |||||||| | ||||| ||||| | Sbjct 4056279 TGATCCATCTCAAAGCCCA-GTCGGCTTTTGCTTTATACATGGGATAGTTTCAATGGCAT 4056221 Query 122894 CAAATAA 122900 ||||| Sbjct 4056220 TGAATAA 4056214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031945047200