Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq1 82.4 9e-11 >seq2 Length=4155432 Score = 138 bits (152), Expect = 1e-27 Identities = 344/518 (66%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423 |||||| || ||||| || || | | || ||||| | || ||||| | || || || Sbjct 221051 ACCTTGAGAAGCTGGAGAACCTTGGTAAGTTTCATAAGTACCTTCAACAGCAGCTAACTC 220992 Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483 | | ||||| | || || ||||| || ||||||||||| ||||||||| | ||| Sbjct 220991 AGTGGAAGCCTCAATAGCAGCATGATAAATAGTTTCAAAAATTTGAGCATTCAATTGCTT 220932 Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543 ||||| || ||||| | | || ||| || || ||||| || | ||||||||| Sbjct 220931 AGCCTCTGGAGATTCAAATGGCAATCTCAACATCATGAAAACATCAGCCAAACCTTGGAC 220872 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGATAAA 118602 ||| | |||| || | ||||||| ||||| | | ||| ||| || ||||| | Sbjct 220871 ACCAACAGCAATAGGTCTGTGTCTCAAGTTAGATCTTCTAGC-TTCTGGGACTGGATAGA 220813 Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662 | || || || |||| | | || | || ||||| ||||| || | ||| ||||| | || Sbjct 220812 AGTTTCTGTCAATAATCTTGTTCAAGTTCTTGGTCACAACTTTAGAGATATCATGCAACT 220753 Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA---------GGAAGGGCGA 118713 | || | | | || | || ||||||| |||| | | || | || | Sbjct 220752 TATCAAAGTTATAAGTAGCAGATTCTTCAT---CATATTCAACGAAAGCTGGTAATGCAA 220696 Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773 || |||| ||||| |||| || |||| | ||| | || || | |||||| | Sbjct 220695 CAGAAGCCAAGTTACAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCACAAC 220636 Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAG-TTCTTTTGATTTGACTTTGTGTTACACGCA 118832 ||||||| ||| || || | ||||| |||||||| || || || | ||||| ||| Sbjct 220635 ACAAGTTGGAAGATTTGAT-AAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAGCA 220577 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870 || || || | |||| |||| || || || || ||||| Sbjct 220576 TCTTTATACAACATGAATGGAGTACCAGTTTCAGTTTG 220539 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/148 (73%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 179968 GGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTC 180027 ||||| ||||| |||| ||| | |||||| | ||||||||||| || | | ||| Sbjct 3400417 GGGAAAACACCATAGTAATCTCTACCAACAATTTTTAGACCAGCAACAGCTAAAGACTTA 3400476 Query 180028 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCTGCCTTG 180087 ||||| ||||| || |||| || || ||||||||| | || | || ||||| ||| Sbjct 3400477 GCGGAGTCACCTTCTGTCAAAATAAGAGTACACTTTTCGCTTTCTCTGGTTCCTGCTTTG 3400536 Query 180088 TTCGCGTCGTCCAAC-TTGGGAATACCA 180114 ||||| || ||||| ||||| ||||| Sbjct 3400537 TTCGCATCCACCAACTTTGGGTGTACCA 3400564 >seq1 Length=4909981 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| | ||| || || | ||| || ||||| || ||||| || || Sbjct 4056455 GGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCC 4056396 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||| | ||||| ||| ||||||||||| || | | ||| || ||||||||||| || Sbjct 4056395 TGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAAT 4056336 Query 130135 CCCCTCCACACACGCGAACGCAA 130157 || || ||| || || |||| Sbjct 4056335 ACCTTCAACAGCAGCAAAGGCAA 4056313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435145886920