Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 138 1e-27
seq1 82.4 9e-11
>seq2
Length=4155432
Score = 138 bits (152), Expect = 1e-27
Identities = 344/518 (66%), Gaps = 16/518 (3%)
Strand=Plus/Minus
Query 118364 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 118423
|||||| || ||||| || || | | || ||||| | || ||||| | || || ||
Sbjct 221051 ACCTTGAGAAGCTGGAGAACCTTGGTAAGTTTCATAAGTACCTTCAACAGCAGCTAACTC 220992
Query 118424 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT 118483
| | ||||| | || || ||||| || ||||||||||| ||||||||| | |||
Sbjct 220991 AGTGGAAGCCTCAATAGCAGCATGATAAATAGTTTCAAAAATTTGAGCATTCAATTGCTT 220932
Query 118484 GGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGAC 118543
||||| || ||||| | | || ||| || || ||||| || | |||||||||
Sbjct 220931 AGCCTCTGGAGATTCAAATGGCAATCTCAACATCATGAAAACATCAGCCAAACCTTGGAC 220872
Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCACGGGATAAA 118602
||| | |||| || | ||||||| ||||| | | ||| ||| || ||||| |
Sbjct 220871 ACCAACAGCAATAGGTCTGTGTCTCAAGTTAGATCTTCTAGC-TTCTGGGACTGGATAGA 220813
Query 118603 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 118662
| || || || |||| | | || | || ||||| ||||| || | ||| ||||| | ||
Sbjct 220812 AGTTTCTGTCAATAATCTTGTTCAAGTTCTTGGTCACAACTTTAGAGATATCATGCAACT 220753
Query 118663 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA---------GGAAGGGCGA 118713
| || | | | || | || ||||||| |||| | | || | || |
Sbjct 220752 TATCAAAGTTATAAGTAGCAGATTCTTCAT---CATATTCAACGAAAGCTGGTAATGCAA 220696
Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773
|| |||| ||||| |||| || |||| | ||| | || || | |||||| |
Sbjct 220695 CAGAAGCCAAGTTACAAACAGCAGTTTCATTTTCATCTGAATATTCGACAATTTCACAAC 220636
Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAG-TTCTTTTGATTTGACTTTGTGTTACACGCA 118832
||||||| ||| || || | ||||| |||||||| || || || | ||||| |||
Sbjct 220635 ACAAGTTGGAAGATTTGAT-AAGACCAAGATTCTTTTGGTTGGATTTAGCATTACAAGCA 220577
Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870
|| || || | |||| |||| || || || || |||||
Sbjct 220576 TCTTTATACAACATGAATGGAGTACCAGTTTCAGTTTG 220539
Score = 84.2 bits (92), Expect = 3e-11
Identities = 108/148 (73%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 179968 GGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTC 180027
||||| ||||| |||| ||| | |||||| | ||||||||||| || | | |||
Sbjct 3400417 GGGAAAACACCATAGTAATCTCTACCAACAATTTTTAGACCAGCAACAGCTAAAGACTTA 3400476
Query 180028 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCTGCCTTG 180087
||||| ||||| || |||| || || ||||||||| | || | || ||||| |||
Sbjct 3400477 GCGGAGTCACCTTCTGTCAAAATAAGAGTACACTTTTCGCTTTCTCTGGTTCCTGCTTTG 3400536
Query 180088 TTCGCGTCGTCCAAC-TTGGGAATACCA 180114
||||| || ||||| ||||| |||||
Sbjct 3400537 TTCGCATCCACCAACTTTGGGTGTACCA 3400564
>seq1
Length=4909981
Score = 82.4 bits (90), Expect = 9e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| || ||| | ||| || || | ||| || ||||| || ||||| || ||
Sbjct 4056455 GGCAAAGTCTGTGTGCAAACCTTCATCTCTGGAAATAAGTTCGTTGGAGAAAGTCAACCC 4056396
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
|||||| | ||||| ||| ||||||||||| || | | ||| || ||||||||||| ||
Sbjct 4056395 TGGCATCAAACCCCTCTTTTTCAACCAGAAGATGGAAGCAAAAGAACCAGAGAAGAAAAT 4056336
Query 130135 CCCCTCCACACACGCGAACGCAA 130157
|| || ||| || || ||||
Sbjct 4056335 ACCTTCAACAGCAGCAAAGGCAA 4056313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435145886920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |