Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 127 2e-24 seq3 91.5 2e-13 seq4 89.7 6e-13 >seq1 Length=4909981 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | || || || || || ||| | || ||||| || | Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || ||||| |||||||| || ||||| |||||||| Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||||||||||||| | || |||| | ||| | | ||||| || Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||| |||||||| | ||| | || ||| Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTG 2135684 Score = 122 bits (134), Expect = 1e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 ||||||||||| || |||||||| | || || || || || ||| | || ||||| || Sbjct 2136127 ATAATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCT 2136068 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||| | |||| ||| | ||| | || ||||| |||||||| || ||||| |||||| Sbjct 2136067 TCTGACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGAC 2136008 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || || | | ||||||||||||||||| | || |||| | ||| | | ||||| Sbjct 2136007 CAACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTAC 2135948 Query 27583 AATGTCCAAAAGGAATCCAC 27602 || ||||||| |||||||| Sbjct 2135947 AACATCCAAAAAGAATCCAC 2135928 >seq3 Length=2682731 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || ||||| ||||| ||||| || || || Sbjct 829807 ATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTCC 829748 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||| || || ||||| || || || Sbjct 829747 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAA 829688 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 829687 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 829628 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||||||||| | || | |||||| Sbjct 829627 ATCCAAAAGGAATCCACCTTGCACTTGGTCTTG 829595 >seq4 Length=2685930 Score = 89.7 bits (98), Expect = 6e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || || || || ||||| | || || || || || | ||||| ||| | || | Sbjct 2595151 ACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATTGACAATGTCAAATCC 2595092 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || ||||| ||||| || || ||||| || ||||| || | | || ||||||||||| Sbjct 2595091 AAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAA 2595032 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||| | || |||| | ||||| | ||||| ||| ||||||| ||||| ||| | ||| Sbjct 2595031 CAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAAGAATCTACTTTGCAT 2594972 Query 27610 CTAGTCTTG 27618 | |||||| Sbjct 2594971 TTGGTCTTG 2594963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310350097840