Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3 152 4e-32
seq4 136 3e-27
seq1 125 6e-24
>seq3
Length=2682731
Score = 152 bits (168), Expect = 4e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| | || || ||| | ||||| |||||||| ||| | |||
Sbjct 829807 ATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTCC 829748
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || || |||||||||||||| || ||||| ||||||
Sbjct 829747 GACACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAA 829688
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || |||||||||||||| || || | || || ||||||
Sbjct 829687 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 829628
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| |||||||| || ||||| || ||||| ||| | ||| | |||||
Sbjct 829627 ATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 829581
>seq4
Length=2685930
Score = 136 bits (150), Expect = 3e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || |||||| |||| || || | ||||| | ||||| ||| | |||||| | |||
Sbjct 2595166 TTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCATT 2595107
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | |||||| || ||||||||||||||||| || ||||| || ||||| | ||
Sbjct 2595106 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 2595047
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || |||||||||||||| | ||| |||| || ||||| || |||||
Sbjct 2595046 ATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAAA 2594987
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || || |||||||| ||| | ||| | |||||
Sbjct 2594986 GAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949
>seq1
Length=4909981
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || | || || || | || ||| | ||||| ||| | ||
Sbjct 2135896 ATGCAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2135837
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| ||||| || ||||| || |||
Sbjct 2135836 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2135777
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || ||||||||||| | ||| | || || ||||||
Sbjct 2135776 CAAAGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135717
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||| || || || || |||||||||||| | ||| | |||||
Sbjct 2135716 ATTCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGAGGTGG 2135670
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || || || | || || || | || ||| | ||||| ||| | ||
Sbjct 2136124 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCT 2136065
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||||||||| ||||| || ||||| || |||
Sbjct 2136064 GACACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAA 2136005
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || || |||||||| | ||| | || || ||||||
Sbjct 2136004 CAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTACAAC 2135945
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| || || || || || ||||||||| | ||| | ||||| ||
Sbjct 2135944 ATCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGGTAT 2135895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918361944640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |