Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 1e-18
seq4 96.9 2e-15
seq1 93.3 3e-14
>seq3
Length=2682731
Score = 107 bits (118), Expect = 1e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || ||||| | || || || ||||| |||| |||||| |
Sbjct 829810 AAGATGCAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCC 829751
Query 27847 ACCGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||||| | | ||||| |||||| || || |||||||||||| |||| |
Sbjct 829750 TCCGACACTATTGACAAT--GTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTG 829693
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || ||||||||||| || | | | ||||| || |
Sbjct 829692 ATCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 829633
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| || ||| ||||| ||||| ||| | ||| | || ||
Sbjct 829632 ACAACATCCAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGAGGTGG 829581
>seq4
Length=2685930
Score = 96.9 bits (106), Expect = 2e-15
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 27798 TTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCGACG--AT 27855
||| || |||||| | ||||| ||| ||||| | || |||||| ||||| ||
Sbjct 2595167 TTTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCAT 2595108
Query 27856 GTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGG 27915
||||| |||||| || || |||||||||||| |||| || || ||| |
Sbjct 2595107 TGACAAT--GTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGA 2595050
Query 27916 TTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAA 27975
|| || ||||| || ||||||||||| || | | | | | || || ||||| ||||||
Sbjct 2595049 TTGATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAA 2594990
Query 27976 AAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||| |||||||||||||| ||| | ||| | || ||
Sbjct 2594989 AAAGAATCTACTTTGCATTTGGTCTTGAGATTGAGAGGTGG 2594949
>seq1
Length=4909981
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942
||||| |||||| |||| || || ||| | || |||||||| || || ||||||||
Sbjct 2135803 GACAAGGAAGGTATTCCACCAGACCAACAAAGATTGATTTTTGCTGGTAAGCAATTGGAA 2135744
Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|| | | | |||||| || |||||||| |||||||| ||| |||||||||||||||
Sbjct 2135743 GATGGCAGAACCTTGTCTGACTACAACATTCAAAAAGAATCCACATTGCATTTGGTTTTG 2135684
Query 28003 CGTTTGCGTGGCGG 28016
| ||| | || ||
Sbjct 2135683 AGATTGAGAGGTGG 2135670
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||||||||| || || || | ||||| ||| || || | || || ||| |
Sbjct 2136125 AATGCAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTC 2136066
Query 27849 CGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
||| | | ||||| ||||| || || ||||| |||||| |||| ||
Sbjct 2136065 TGACACTATTGACAAT--GTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGAC 2136008
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|| ||| | || |||||||| || || || ||||| || | | | |||||| || |||
Sbjct 2136007 CAACAAAGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAACCTTGTCTGACTAC 2135948
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||||||| ||| ||||| ||||||||| | ||| | || ||
Sbjct 2135947 AACATCCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGAGGTGG 2135898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862369640489
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |