Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1 127 5e-24
seq3 116 9e-21
seq4 113 1e-19
>seq1
Length=4909981
Score = 127 bits (140), Expect = 5e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
||||| |||||||||||||| || || | | ||| || |||||||||| |||||| ||
Sbjct 2135928 GTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAACTGCTTACCA 2135987
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | ||||||||| || |||| ||||||||||| || ||||| ||
Sbjct 2135988 GCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 2136047
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || || || |||||||| |||||| || | |||||| || || || || | |||
Sbjct 2136048 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTC 2136107
Query 211098 TTTACAAACACCTGCATT 211115
|| || || | ||||||
Sbjct 2136108 TTGACGAAAATTTGCATT 2136125
Score = 122 bits (134), Expect = 2e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
||||| |||||||| ||||| || || | | ||| || |||||||||| ||||| ||
Sbjct 2135700 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCA 2135759
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| || || | | ||||||||| || |||| ||||||||||| || ||||| ||
Sbjct 2135760 GCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 2135819
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || || || |||||||| |||||| || | |||||| || || || || | |||
Sbjct 2135820 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTC 2135879
Query 211098 TTTACAAACACCTGCAT 211114
|| ||||| | |||||
Sbjct 2135880 TTGACAAAGATTTGCAT 2135896
>seq3
Length=2682731
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | ||||| || ||||||||||| || || | | || || ||
Sbjct 829592 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 829651
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| || || || || ||||| | | |||||| ||||| |||| ||||| ||
Sbjct 829652 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTT 829711
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| ||| || || || || ||||| ||| ||| || || || || ||
Sbjct 829712 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAAT 829771
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| ||||| | || || || || | ||||| ||
Sbjct 829772 GGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810
>seq4
Length=2685930
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | || | ||| || ||||||||||| || || || | |||||| || ||
Sbjct 2594960 TCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCC 2595019
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| || || || || ||||| | | |||||||||||| |||| ||||| ||
Sbjct 2595020 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 2595079
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || ||||| ||| || || || |||||||| || ||| || || | || ||
Sbjct 2595080 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 2595139
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|| || || || | ||| || || ||
Sbjct 2595140 GGTTTTACCAGTCAAAGTTTTAACGAA 2595166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151896038555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |