Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-33 seq3 156 1e-32 seq4 143 6e-29 >seq1 Length=4909981 Score = 158 bits (174), Expect = 3e-33 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||| | |||||||||||||||| ||||| || | ||| ||||| || Sbjct 2135909 TCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAGGTTCTGCC 2135968 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | |||||| ||||| || || | || ||||||||| || |||||||||||||| Sbjct 2135969 ATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 2136028 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| ||| ||| || || ||||| || | ||| || || || ||||| Sbjct 2136029 GTCTTGAATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 2136088 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || || || || | ||| | ||||||| Sbjct 2136089 GGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 |||||||||||||| | ||||| || | ||| ||||| |||||||| | ||||| ||| Sbjct 2135700 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTGCCATCTTCCAATTGCTTACCA 2135759 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 || || || | || ||||||||| || |||||||||||||||||||| ||||| ||| Sbjct 2135760 GCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTG 2135819 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| || || ||||| || | ||| || || || ||||| || || || || || || Sbjct 2135820 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTC 2135879 Query 225697 TTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 2135880 TTGACAAAGATTTGCAT 2135896 Score = 93.3 bits (102), Expect = 1e-13 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||||||||| || || || || || ||||||||||| || |||||||| Sbjct 3246392 GAAAATTTGACCATCAGTAATGGAAATGACGTTAGTTGGGATATAAGCGGAGACATCACC 3246333 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578 |||| ||||| | || || || || |||| || |||||||| ||| Sbjct 3246332 ACCTTGAGTTTCAATGACTGGCAAAGCGGTTAAAGAACCACCACCCAAA 3246284 >seq3 Length=2682731 Score = 156 bits (172), Expect = 1e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| | |||||||| ||||||| ||||| || | ||||||||| || Sbjct 829592 TCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACC 829651 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || ||||| ||||| | || |||||| || || ||||||||||| || Sbjct 829652 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTT 829711 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| || ||| || || ||||| |||| ||| || || | || || Sbjct 829712 GTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAAT 829771 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| || ||||| | ||| | |||||| || Sbjct 829772 GGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810 >seq4 Length=2685930 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | || | ||| ||||||||||||| |||||| || | | ||||| || Sbjct 2594960 TCTCAAGACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCC 2595019 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || ||||| ||||| | || ||||||||| || ||||||||||| || Sbjct 2595020 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 2595079 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||| ||||| || ||| || |||||||| || | ||| || || || || || Sbjct 2595080 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAAT 2595139 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704 || || || ||||||||||| | ||| Sbjct 2595140 GGTTTTACCAGTCAAAGTTTTAACGAA 2595166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531093044858