Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq4 172 1e-37 seq3 170 4e-37 seq1 161 2e-34 >seq4 Length=2685930 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| || || |||||||||||| |||||||||| ||| || | |||||| || Sbjct 2594967 ACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATCTTCC 2595026 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||||||||| | |||||||||| |||||||| || |||||||| Sbjct 2595027 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGA 2595086 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || | || || ||||| |||| ||||||||| | || || || ||| Sbjct 2595087 ATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTTTTA 2595146 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || |||||||| |||||||| Sbjct 2595147 CCAGTCAAAGTTTTAACGAA 2595166 Score = 109 bits (120), Expect = 1e-18 Identities = 177/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006 || ||||||||| || || |||| | ||| || || || | ||| || ||||| || | Sbjct 345323 AACGAAGTCAACAATGGAGGTGTCATCTTCAGAACCATCAATGTCGTGTTCAACGTAGAC 345264 Query 317007 AGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCAT 317066 || |||| ||| | | ||||| ||||| | |||||||| |||| || ||||| Sbjct 345263 GGTCTTCAATTCATCTTGGGATGGGAAACCTTCGACTTGACCGTTAGCAATAGCTCTCAT 345204 Query 317067 CAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAG 317126 || || || || |||||||| || || || || | ||| || | | || |||||| Sbjct 345203 CAAGGTAGATTTACCAGCACCGTTAGGACCACACAAACCGTATCTTCTACCTCTCTTCAA 345144 Query 317127 ATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATC 317186 | || | || |||||| | || ||| |||| || |||| |||||||||||| | Sbjct 345143 TCTCAATTGAGTTCTGTTCAACAAGATTTTAGCACCGTAAGCCAAAGAGAACTCACAGTT 345084 Query 317187 ACACAGGTCCTCGCC 317201 ||||| ||| || || Sbjct 345083 ACACAAGTCTTCACC 345069 >seq3 Length=2682731 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| || || ||| ||| ||||||||||||||||||| | || | ||||| || Sbjct 829599 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 829658 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||||||||| | |||||| ||| |||||||| || ||||||||| Sbjct 829659 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 829718 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || | || |||||||| || | ||||||||| || || || |||||| Sbjct 829719 ATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCTTA 829778 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| || || |||||||| || ||||| || Sbjct 829779 CCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810 >seq1 Length=4909981 Score = 161 bits (178), Expect = 2e-34 Identities = 164/211 (78%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| || || ||| ||||||||||||||||||||||| |||| || | |||||| || Sbjct 2135916 ACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAG-GTTCTGCCATCTTC 2135974 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | || || || ||||| ||||| | ||||||||| |||||||| ||||||||||| Sbjct 2135975 CAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG 2136034 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | || || | || |||||||| |||| ||| ||||| | |||||| || || Sbjct 2136035 AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTT 2136094 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| || || ||||| ||||| || |||||| Sbjct 2136095 ACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125 Score = 159 bits (176), Expect = 7e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| ||| || ||| ||||||||| ||||||||||||| |||| || | |||||| || Sbjct 2135688 ACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTGCCATCTTC 2135746 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 | ||| || || ||||| ||||| | ||||||||| |||||||| ||||||||||| Sbjct 2135747 CAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG 2135806 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 ||||| | || || | || |||||||| |||| ||| ||||| | |||||| || || Sbjct 2135807 AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTT 2135866 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || ||||| || || || ||||| Sbjct 2135867 ACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739106120578