Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq4 172 1e-37
seq3 170 4e-37
seq1 161 2e-34
>seq4
Length=2685930
Score = 172 bits (190), Expect = 1e-37
Identities = 158/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||| || || |||||||||||| |||||||||| ||| || | |||||| ||
Sbjct 2594967 ACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAAAGGGTTCTGCCATCTTCC 2595026
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||||||||| | |||||||||| |||||||| || ||||||||
Sbjct 2595027 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGA 2595086
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || || ||||| |||| ||||||||| | || || || |||
Sbjct 2595087 ATCTTGGATTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAGGTAATGGTTTTA 2595146
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||| ||||||||
Sbjct 2595147 CCAGTCAAAGTTTTAACGAA 2595166
Score = 109 bits (120), Expect = 1e-18
Identities = 177/255 (69%), Gaps = 0/255 (0%)
Strand=Plus/Minus
Query 316947 AATGAAGTCAACGATAGACGTGTTAGATTCGGATCCGTCGAGGTCATGCTCAACATATGC 317006
|| ||||||||| || || |||| | ||| || || || | ||| || ||||| || |
Sbjct 345323 AACGAAGTCAACAATGGAGGTGTCATCTTCAGAACCATCAATGTCGTGTTCAACGTAGAC 345264
Query 317007 AGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCAT 317066
|| |||| ||| | | ||||| ||||| | |||||||| |||| || |||||
Sbjct 345263 GGTCTTCAATTCATCTTGGGATGGGAAACCTTCGACTTGACCGTTAGCAATAGCTCTCAT 345204
Query 317067 CAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAG 317126
|| || || || |||||||| || || || || | ||| || | | || ||||||
Sbjct 345203 CAAGGTAGATTTACCAGCACCGTTAGGACCACACAAACCGTATCTTCTACCTCTCTTCAA 345144
Query 317127 ATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATC 317186
| || | || |||||| | || ||| |||| || |||| |||||||||||| |
Sbjct 345143 TCTCAATTGAGTTCTGTTCAACAAGATTTTAGCACCGTAAGCCAAAGAGAACTCACAGTT 345084
Query 317187 ACACAGGTCCTCGCC 317201
||||| ||| || ||
Sbjct 345083 ACACAAGTCTTCACC 345069
>seq3
Length=2682731
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| ||||||||||||||||||| | || | ||||| ||
Sbjct 829599 ACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 829658
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || ||||||||||| | |||||| ||| |||||||| || |||||||||
Sbjct 829659 AATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGG 829718
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || |||||||| || | ||||||||| || || || ||||||
Sbjct 829719 ATCTTGGATTTGACATTGTCAATAGTGTCGGAGGATTCGACTTCAAGGGTAATGGTCTTA 829778
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| || || |||||||| || ||||| ||
Sbjct 829779 CCCGTTAAGGTTTTAACGAAAATTTGCATCTT 829810
>seq1
Length=4909981
Score = 161 bits (178), Expect = 2e-34
Identities = 164/211 (78%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| || || ||| ||||||||||||||||||||||| |||| || | |||||| ||
Sbjct 2135916 ACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTAGTCAGACAAG-GTTCTGCCATCTTC 2135974
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| || || || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct 2135975 CAACTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG 2136034
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || || | || |||||||| |||| ||| ||||| | |||||| || ||
Sbjct 2136035 AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTT 2136094
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
||| || || ||||| ||||| || ||||||
Sbjct 2136095 ACCAGTTAAGGTCTTGACGAAAATTTGCATT 2136125
Score = 159 bits (176), Expect = 7e-34
Identities = 163/210 (78%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949
|||| ||| || ||| ||||||||| ||||||||||||| |||| || | |||||| ||
Sbjct 2135688 ACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGACAAG-GTTCTGCCATCTTC 2135746
Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009
| ||| || || ||||| ||||| | ||||||||| |||||||| |||||||||||
Sbjct 2135747 CAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTG 2135806
Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069
||||| | || || | || |||||||| |||| ||| ||||| | |||||| || ||
Sbjct 2135807 AATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTTTT 2135866
Query 283070 ACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || ||||| || || || |||||
Sbjct 2135867 ACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739106120578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |