Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017- 01-05] 7 sequences; 19,653,141 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq3 104 2e-17 >seq1 Length=4909981 Score = 111 bits (122), Expect = 1e-19 Identities = 172/241 (71%), Gaps = 6/241 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| ||| | ||| || |||||||||||||| Sbjct 2135891 TTGCATACCACCTCTCAATCTCAAAACCAAGTGCAATGTGGATTCTTTTTGGATGTTGTA 2135950 Query 44164 ATC-GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || | | || | || | || |||| |||||| || ||||| ||||| | || || | Sbjct 2135951 GTCAGACAAGGTTCTGC-CATCTTCCAACTGCTTACCAGCAAAAATCAATCTTTGTTGGT 2136009 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGC 44280 ||| || | ||||||||| || ||||| ||| || ||| | || ||||| | Sbjct 2136010 CTGGTGGAATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATAGTGTCAGA 2136067 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| || |||| || || || || || || | |||||| ||||| |||||||| || Sbjct 2136068 AGATTCAACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACGAAAATTTGCATTAT 2136127 Query 44341 G 44341 | Sbjct 2136128 G 2136128 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169 || ||||||| |||||| |||| || | ||| || ||||| |||||||| || | | Sbjct 2135670 CCACCTCTCAATCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATGTTGTAGTCAGAC 2135729 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || | || | || |||| ||||| || ||||| ||||| | || || |||| || Sbjct 2135730 AAGGTTCTGC-CATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGTTGGTCTGGTGG 2135788 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | ||||||||| || ||||| ||| || ||| | || ||||| | ||||| Sbjct 2135789 AATACCTTCCTTGTCTTGAATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTCA 2135846 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||| || || || || || || | |||||| || ||||||||||| Sbjct 2135847 ACTTCCAAAGTGATGGTTTTACCAGTTAAGGTCTTGACAAAGATTTGCAT 2135896 >seq3 Length=2682731 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-- 44168 || ||||||| |||||| |||| ||| | ||| ||||||||||||||||| || | Sbjct 829581 CCACCTCTCAATCTCAAGACCAAGTGCAAGGTGGATTCCTTTTGGATGTTGTAGTCAGAC 829640 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | || |||| || || || ||||||||||| | || ||||| | | Sbjct 829641 AAAGTT--CTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGATCAGGTG 829698 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | |||||| || || ||||| || || ||| | || ||||||| |||||| Sbjct 829699 GAATACCTTCTTTGTCTTGGATCTTGGATTTGACATTGT--CAATAGTGTCGGAGGATTC 829756 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||| ||||| ||||| | ||| || ||||| |||||||| Sbjct 829757 GACTTCAAGGGTAATGGTCTTACCCGTTAAGGTTTTAACGAAAATTTGCAT 829807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990369288319