Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20fibuligera_20[genbank_20GCA_5F001936275.1_202017-
01-05] 7 sequences; 19,653,141 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq4 147 5e-30
seq3 134 3e-26
seq1 132 1e-25
>seq4
Length=2685930
Score = 147 bits (162), Expect = 5e-30
Identities = 161/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
|||||| |||||| | || || ||||| || ||| | || || ||| || ||||||||
Sbjct 2595167 TTTCGTTAAAACTTTGACTGGTAAAACCATTACCTTGGAAGTCGAATCTTCCGACACCAT 2595108
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
|| || |||||| |||||||| ||||||||||| || || || ||||| ||| || |
Sbjct 2595107 TGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 2595048
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || ||||| | |||||||| || || ||| | || || || |||||||
Sbjct 2595047 GATCTTTGCTGGTAAACAATTGGAAGATGGCAGAACCCTTTCTGACTACAATATCCAAAA 2594988
Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| || ||||| | || |||||| | |||
Sbjct 2594987 AGAATCTACTTTGCATTTGGTCTTGAGATTGAGA 2594954
>seq3
Length=2682731
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || || || || || ||||| || || ||| ||| |||
Sbjct 829804 CAAATTTTCGTTAAAACCTTAACGGGTAAGACCATTACCCTTGAAGTCGAATCCTCCGAC 829745
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || |||||| ||||| || ||||||||||| || || || || || |||
Sbjct 829744 ACTATTGACAATGTCAAATCCAAGATCCAAGACAAAGAAGGTATTCCACCTGATCAACAA 829685
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| | |||||||| || ||| | | || || ||| ||
Sbjct 829684 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATC 829625
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || |||| | || |||||| | |||
Sbjct 829624 CAAAAGGAATCCACCTTGCACTTGGTCTTGAGATTGAGA 829586
>seq1
Length=4909981
Score = 132 bits (146), Expect = 1e-25
Identities = 163/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || | || || ||||| ||||| | || || ||| || |||
Sbjct 2136121 CAAATTTTCGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTGAC 2136062
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| ||||| ||||| || || || ||||| |||
Sbjct 2136061 ACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 2136002
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102
|| | || || || || || ||| | |||||||| || || |||| | || || ||| |
Sbjct 2136001 AGATTGATTTTTGCTGGTAAGCAGTTGGAAGATGGCAGAAC-CTTGTCTGACTACAACAT 2135943
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||||| ||| |||| | ||||||||| | |||
Sbjct 2135942 CCAAAAAGAATCCACATTGCACTTGGTTTTGAGATTGAGA 2135903
Score = 120 bits (132), Expect = 7e-22
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || | || || ||||| ||||| | || || ||| || |||
Sbjct 2135893 CAAATCTTTGTCAAGACCTTAACTGGTAAAACCATCACTTTGGAAGTTGAATCTTCTGAC 2135834
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||| ||||| ||||| || || || ||||| |||
Sbjct 2135833 ACTATTGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCACCAGACCAACAA 2135774
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCC-GATTATAACGT 178102
|| | || || || || || || | |||||||| || || |||| | || || ||| |
Sbjct 2135773 AGATTGATTTTTGCTGGTAAGCAATTGGAAGATGGCAGAAC-CTTGTCTGACTACAACAT 2135715
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||||| ||| ||||| | ||||||||| | |||
Sbjct 2135714 TCAAAAAGAATCCACATTGCATTTGGTTTTGAGATTGAGA 2135675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203731092040358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |