Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5 196 5e-45 seq10 172 6e-38 >seq5 Length=1624186 Score = 196 bits (216), Expect = 5e-45 Identities = 584/881 (66%), Gaps = 29/881 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| || || ||| | ||| ||||| || || || ||||| | || || || |||| Sbjct 610695 TTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTTT 610636 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGT-ACCCCAGTTCCGTAACT 16030 |||| |||||||| ||||| | | | ||| ||| || ||| || |||| Sbjct 610635 CCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAGGATACTAAC- 610577 Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAA-GTCGCAATTAATTCCTATAAG 16089 || | || || ||||| || | |||||| |||||| || ||| || ||||||| | Sbjct 610576 AACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCA-TTCATTCCTAACAA 610518 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 ||| | |||||| | ||| ||| | |||||| |||| ||||| | ||||| Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458 Query 16150 ATCGGTGGC--TCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCG 16207 | | || | || | ||| | | | | | || || ||||||||| Sbjct 610457 TTTTTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGAGAGTA--CAATAGACACGCA 610400 Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267 || || ||| | |||||||| ||||| || | ||||| ||||| || || |||||| Sbjct 610399 AAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGC 610340 Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327 || |||| ||| || ||||| || || | |||||| || || || || ||||| || Sbjct 610339 ATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCT 610280 Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCAT 16387 || || | ||||| || | | ||||| || || ||| | | | ||||| Sbjct 610279 TCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCAA 610220 Query 16388 TTCTGTA---CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAAC 16444 ||| |||| || ||||| | ||| || | || ||||| ||||| || ||| Sbjct 610219 C---GTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAAC 610163 Query 16445 AAT--TTCT-CTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501 || |||| | | || |||| || | ||||| ||||| || ||||| || | Sbjct 610162 AAGAATTCTGCCTCTTTCTGA---TCTTTGATATAAGTATCTATAAGTAAGGAATAGGTC 610106 Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCT-AT 16560 || || |||||||| || || ||| |||||||||||||||||| ||||| ||| | Sbjct 610105 TCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTC-GCTCAC 610047 Query 16561 TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGC 16620 ||| || || |||| || | | || || ||||| || || |||||||| ||||| Sbjct 610046 TTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGC 609987 Query 16621 AAAAAACGCCAATA-TGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT---ATGCC 16676 ||||||||| || | | || | |||||||| || || |||| | || || Sbjct 609986 AAAAAACGCTAAAACTCTGGAT-ATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCC 609928 Query 16677 AATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCA-AAAGCTAGCCACTGCC 16735 |||| | || |||||| || ||| | ||||| | ||||| |||| | ||| ||||| Sbjct 609927 AATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGAT-GCCTCTGCC 609869 Query 16736 TTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 ||||||||||| | |||||| |||| ||| | || ||||| Sbjct 609868 TTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAA 609828 >seq10 Length=744508 Score = 172 bits (190), Expect = 6e-38 Identities = 564/871 (65%), Gaps = 33/871 (4%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| |||||| || | ||||||||| ||||| |||||||| | || || || |||| Sbjct 45630 TTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTTT 45689 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||||||||| ||||| ||| | || ||| | | | ||||| || ||| Sbjct 45690 CCATAAAATCAAATGGATTGGTAACGTTGTAAACCTTGTTGT-TACCCAAGGCGACCAAC 45748 Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089 ||||| || || ||||| | ||||||||||| || | ||| || || || | | Sbjct 45749 -AATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACAA 45807 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 || || | || | || || | | || ||| || || ||||| | ||||| Sbjct 45808 GGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGAT 45867 Query 16150 ATCGGTGGCTCGTG--TTTCAGACGGTGTATGGTTT-------AGGTGTTTAAACATTAG 16200 | |||| |||| ||| || |||||| | ||| ||||| | Sbjct 45868 TTT-----CTCGACAATTTC---CGG-GTCTGGTTTGTTCTGCAAGTGAGAAAACAACAA 45918 Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 || || |||||| || | ||||||||||||| ||| | |||||| ||||| || || Sbjct 45919 GCAAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAA 45978 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || ||||| |||| ||| || |||||||| || | |||||| || ||||| ||||| Sbjct 45979 GCCCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAA 46038 Query 16321 TATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACG 16380 || || ||||||| ||||| || | |||| ||| || || || | | | Sbjct 46039 AATGCCTTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGGTCGTCGTT 46098 Query 16381 AATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTT 16440 |||||| || |||| ||||| ||||| || || || || || ||||| || Sbjct 46099 GATCCATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATT 46158 Query 16441 AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACAT 16500 ||||| ||| |||| | || | | |||||| ||||||| || ||| | Sbjct 46159 GAACAAAAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATAGCGAGTATGT 46218 Query 16501 TTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTAT 16560 ||| || || || ||||| || ||||| || || ||||| | ||||| | | Sbjct 46219 TTCCGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGAC 46278 Query 16561 TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGC 16620 || ||||| | |||| ||| ||| |||||| || || || ||||| ||||| Sbjct 46279 CTGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGC 46338 Query 16621 AAAAAACGCCAATATGTGCTTAATGAAATA-------TTTTTCGTCAGATGTAAGAATAT 16673 |||||||||||| | | ||||||| | |||| ||||| | | | Sbjct 46339 AAAAAACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCA----ACCGGTTGT 46394 Query 16674 GCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTG 16733 ||| || | ||||| ||||| | ||| | || || | ||||| || || | | Sbjct 46395 TCCAGTCGTGCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGG 46454 Query 16734 CCTTTTTATACATTTTCCAAATATCATTGTA 16764 |||| || ||||| | |||||| |||| ||| Sbjct 46455 CCTTCTTGTACATCTGCCAAATCTCATGGTA 46485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414118722080