Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1 140 2e-28 >seq1 Length=3127730 Score = 140 bits (154), Expect = 2e-28 Identities = 371/557 (67%), Gaps = 36/557 (6%) Strand=Plus/Minus Query 101676 TTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACT 101735 || |||| || |||||||| || || | ||| || || || || || || || |||| Sbjct 2169223 TTGTAAG-GCTTCAATGTGGTCCTTGTACACGTGGGCGTCACCCATGGTGTGTATGAACT 2169165 Query 101736 CTCCAGGCACTAGATTAGTGACA----TGAGCAATCATGCAAGTTAAAAGAGAATAGCTA 101791 | ||| || | || || ||| || |||||||| |||| ||||| ||| Sbjct 2169164 CACCA--CAGTCCAT--GTCACACACCTGGGCAATCATCTTGGTTAGAAGAGCATACGAC 2169109 Query 101792 GCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAA 101851 ||||| || || || || || || |||||||| ||||| || || || |||| || Sbjct 2169108 GCAATATTGAAAGGAACACCCAAGCCCATATCGCAAGATCTCTGGTATAGGAGACACGAG 2169049 Query 101852 AGCT------TTCCATC------ACAG---ACATAAAATTGACTTAATACATGACAAGGC 101896 |||| | ||||| | || ||||| || ||||| || ||||| ||||| Sbjct 2169048 AGCTGAGGTCTGCCATCTTTAGGAAAGTTTACATAGAACTGACTAAACACATGGCAAGGA 2168989 Query 101897 GGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATCT 101956 || | | |||| ||||| | |||| ||||||||| |||| | || |||||||| Sbjct 2168988 GGAAGCGCCATCTTAGGGAAATCTGGTGGGTTCCAAGCAGACATGATGATTCTTCTATC- 2168930 Query 101957 GTA-GGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCCTTCTCCTTT 102015 ||| ||||| || || | ||| || | || |||||| || || |||| || || Sbjct 2168929 GTACGGGTTGGTCTTCAATTTATGGATAACCTCCGCTAATTGATCCACGCCTTGGCCATT 2168870 Query 102016 ATAATCGCGCCCAACACCT-TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACA 102074 ||| ||| || ||| | || ||||||||||| ||||| |||||||| || ||||| | Sbjct 2168869 ATAGTCG-GCATCACAATTCTTGTATTCTGCTCCAAAATGTCTCCACTGGAACCCATAAA 2168811 Query 102075 CAGGTCCAAGATCTCCTTC----ATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGAT 102130 |||| || | ||| || || ||| |||| || |||| | |||| | | | Sbjct 2168810 CAGGACCTAAATCGCCCTCTCTATTCTTTGTC----AACCCAATACTGTCTAGATACTCT 2168755 Query 102131 CTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTA 102190 || |||||| | ||||| || | ||||| | | || |||| |||| |||||| Sbjct 2168754 CTGCTTCCATTTCCTTCCCAGATCTTAACGCCCTGTTCCGAAAGCTTCTTGCCGTCAGTG 2168695 Query 102191 GATCCTCTGATAAACCA 102207 | || | |||||||| Sbjct 2168694 CAGCCCTTAATAAACCA 2168678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251006279044