Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq4 105 6e-18 seq1 95.1 1e-14 seq6 91.5 1e-13 >seq4 Length=1632271 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 28956 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 29015 || || |||||||| ||| ||||||| | || || |||||||||||| ||| ||| Sbjct 76713 GTCAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAG 76654 Query 29016 CCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 29075 || | || || | | | || | || || ||| || ||||||||| | || | Sbjct 76653 TCCTCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCA 76594 Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 || ||||||||| | |||||||| || || || ||||||| || ||| || |||| Sbjct 76593 GACCAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGAC 76534 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| || || |||||||| ||| | ||| |||| | |||| |||| || Sbjct 76533 TACAACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGG 76481 >seq1 Length=3127730 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | || || ||||| || || ||||| || ||| ||| || | Sbjct 1884993 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1885052 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| ||| ||| || || |||||| | || ||||||| Sbjct 1885053 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1885112 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || ||||| || |||||| | |||||| | ||| || | || ||||| Sbjct 1885113 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1885172 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| |||||||| ||| | ||| |||| | |||| |||| || Sbjct 1885173 ATTCAAAAGGAATCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1885219 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | || || ||||| || || ||||| || ||| ||| || | Sbjct 1884765 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884824 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | ||| ||| ||| || || |||||| | || ||||||| Sbjct 1884825 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884884 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || ||||| || |||||| | |||||| | ||| || | || ||||| Sbjct 1884885 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884944 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| ||||| || ||| | ||| |||| | |||| |||| || Sbjct 1884945 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1884991 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | || || ||||| || || ||||| || ||| ||| || | Sbjct 1884536 AATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTC 1884595 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | | | | ||| ||| ||| || || |||||| | || |||||| Sbjct 1884596 TGACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCA 1884655 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||||||| | || ||||| || |||||| | |||||| | ||| || | || ||||| Sbjct 1884656 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAA 1884715 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| ||||| || ||| | ||| |||| | |||| |||| || Sbjct 1884716 CATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1884763 >seq6 Length=1504906 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 28971 TTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTG 29030 ||| | ||||| ||||| || || || |||||| ||| ||| | | || || | Sbjct 99480 TTCGTTAAAACTTTGACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACCATT 99539 Query 29031 GCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTT 29090 | | || | || || ||| || ||||||||| | || |||||||||||| | Sbjct 99540 GACAATGTCAAATCTAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAACAAAGATTG 99599 Query 29091 ATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAG 29150 |||||||| || || ||| | |||||| || ||| || | || ||||||||||| ||| Sbjct 99600 ATCTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGACTACAATATTCAAAAG 99659 Query 29151 GAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| || | ||| |||| || |||| |||| || Sbjct 99660 GAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 99697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335770304820