Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq4 125 6e-24 seq1 111 1e-19 >seq4 Length=1632271 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || ||||| |||| ||||||||||| |||||||| ||||| ||||| | | Sbjct 76481 CCACCTCTCAATCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 76540 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | |||| |||| ||| || || ||| | || | ||| || ||||| || Sbjct 76541 AAGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 76600 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||||| ||| || | | | | || || || |||| | Sbjct 76601 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACT 76660 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 |||| ||||||||| || ||||| | |||||||| || |||||||| |||| Sbjct 76661 TCCAAGGTAATGGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTTGA 76712 >seq1 Length=3127730 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || || |||| |||||||||||||||||||||||||| ||||| | | Sbjct 1884763 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 1884704 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | || || | ||||| || ||| |||| | ||| || || || || Sbjct 1884703 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1884644 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | | ||| ||| || || | Sbjct 1884643 ATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACT 1884584 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| || |||||||| || || || || || ||||| ||||||||| || Sbjct 1884583 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATTATG 1884533 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || || |||| |||||||||||||||||||||||||| ||||| | | Sbjct 1884991 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 1884932 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | || || | ||||| || ||| |||| | ||| || || || || Sbjct 1884931 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1884872 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | | ||| ||| || || | Sbjct 1884871 ATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACT 1884812 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || || || || || || |||||||| Sbjct 1884811 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || || |||| ||||||||||| |||||||||||||| ||||| | | Sbjct 1885219 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1885160 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | || || | ||||| || ||| |||| | ||| || || || || Sbjct 1885159 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1885100 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | | ||| ||| || || | Sbjct 1885099 ATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACT 1885040 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || || || || || || |||||||| Sbjct 1885039 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258973563504