Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq4 118 9e-22 seq1 107 2e-18 seq6 105 5e-18 >seq4 Length=1632271 Score = 118 bits (130), Expect = 9e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 25029 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 25088 || || |||||||| ||| ||||||| | || || |||||||||||| ||| ||| Sbjct 76713 GTCAAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAG 76654 Query 25089 CCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 25148 || | || || | | | || |||| || ||| || ||||||||| | || | Sbjct 76653 TCCTCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCA 76594 Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 || ||||||||| | |||||||| || || || |||||||| || ||| || |||| Sbjct 76593 GACCAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGAC 76534 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || ||||||||||| ||| | ||| |||| | |||| |||| || Sbjct 76533 TACAACATCCAAAAGGAATCCACTTTGCACTTGGTCCTCAGATTGAGAGGTGG 76481 >seq1 Length=3127730 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || ||||| || || ||||| || ||| ||| || | Sbjct 1884993 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1885052 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||||| ||| ||| || || |||||| | || ||||||| Sbjct 1885053 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1885112 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | || ||||| || |||||||| |||||| | ||| || | || ||||| Sbjct 1885113 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1885172 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||||||| ||| | ||| |||| | |||| |||| || Sbjct 1885173 ATTCAAAAGGAATCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1885219 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | || || ||||| || || ||||| || ||| ||| || | Sbjct 1884765 ATGCAAATCTTCGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTCT 1884824 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||||| ||| ||| || || |||||| | || ||||||| Sbjct 1884825 GACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCAA 1884884 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | || ||||| || |||||||| |||||| | ||| || | || ||||| Sbjct 1884885 CAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAAC 1884944 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||||| || ||| | ||| |||| | |||| |||| || Sbjct 1884945 ATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1884991 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | || || ||||| || || ||||| || ||| ||| || | Sbjct 1884536 AATGCAAATCTTTGTTAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCCTC 1884595 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | | | ||||| ||| ||| || || |||||| | || |||||| Sbjct 1884596 TGACACTATTGACAACGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCACCAGATCA 1884655 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||||||| | || ||||| || |||||||| |||||| | ||| || | || ||||| Sbjct 1884656 ACAAAGATTGATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACCTTGTCTGACTACAA 1884715 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||||| || ||| | ||| |||| | |||| |||| || Sbjct 1884716 CATTCAAAAGGAGTCCACTTTGCACTTGGTCCTTAGATTGAGAGGTGG 1884763 >seq6 Length=1504906 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 25044 TTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTG 25103 ||| | ||||| ||||| || || || |||||| ||| ||| | | || || | Sbjct 99480 TTCGTTAAAACTTTGACTGGTAAGACTATTACCTTGGAAGTTGAATCTTCCGACACCATT 99539 Query 25104 GCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTT 25163 | | || |||| || ||| || ||||||||| | || |||||||||||| | Sbjct 99540 GACAATGTCAAATCTAAGATTCAAGACAAAGAAGGTATCCCACCTGATCAACAAAGATTG 99599 Query 25164 ATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAG 25223 |||||||| || || ||||| |||||| || ||| || | || ||||||||||||||| Sbjct 99600 ATCTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGACTACAATATTCAAAAG 99659 Query 25224 GAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || | ||| |||| || |||| |||| || Sbjct 99660 GAATCCACCTTGCACTTGGTTTTGAGATTGAGAGGTGG 99697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410796579710216