Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq10 221 1e-52 seq4 96.9 4e-15 >seq10 Length=744508 Score = 221 bits (244), Expect = 1e-52 Identities = 569/865 (66%), Gaps = 9/865 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| || || |||||| || | || ||| | | || || | |||| || Sbjct 46536 GAGCCGTTGTTGGTTGAGAACAAGCGGAGATTTGTGTTGATGCCTATCAAGTACCATGAG 46477 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||| |||||||||||||| | ||||||| | || || Sbjct 46476 ATTTGGCAGATGTACAAGAAGGCCGAAGCGTCGTTCTGGACAGCCGAGGAGATTGATTTG 46417 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | || |||| || |||||||| |||||| Sbjct 46416 TCCAAGGATTTGCACGACTGGAACAACCGGTTGACGGAAAACGAGCGGTTTTTCATTTCT 46357 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | || |||| ||||| || || ||||| || ||||||||||| |||| ||| Sbjct 46356 CGGGTTTTGGCGTTTTTTGCTGCGTCGGACGGAATTGTCAACGAGAACTTGGTGGAGAAC 46297 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || || || || ||||| | ||||| || |||||||| || |||||| ||| Sbjct 46296 TTTTCTGCCGAAGTTCAGGTCCCAGAGGCCAAGTTTTTCTACGGGTTCCAGATCATGATG 46237 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 ||||| | || ||||||| || ||| | || |||||||| || | | || | Sbjct 46236 GAGAATATCCATTCGGAAACATACTCGCTATTGATTGACACGTATGTCAAGGACCCTAAG 46177 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 ||| || | |||||| || ||||| ||||| || || |||| | |||||| Sbjct 46176 GAGTCTGAGTT---TTTGTTCAATGCCATTGAGACAATTCCACAAATCAAGCAAAAGGCC 46120 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| || | |||||| || | ||||| || | || | |||| ||| Sbjct 46119 GACTGGGCCTTGAGATGGATCAACGACGACCAGGCCTTGTTTGCTGAAAGATTGGTTGCC 46060 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 || || || || || ||| | ||||| |||||| ||| || | || || ||| | || Sbjct 46059 TTTGCTGCTGTTGAAGGCATTTTCTTCTCGGGCTCTTTTGCTTCTATTTTCTGGTTGAAA 46000 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 ||| | || | ||||| ||| |||| || ||||| | |||| ||| ||||| ||| Sbjct 45999 AAAAGAGGTTTGATGCCGGGCTTGACGTTTTCTAACGAATTGATCTGCAGAGACGAAGGT 45940 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| ||||||||| || ||| |||| || ||| | | ||| | ||| Sbjct 45939 TTGCACACCGACTTTGCTTGCTTGTTGTTTTCTCACTTGCAGAACAAACCAGACCCGGAA 45880 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 ||| | | ||| ||||||| || ||| ||| || | || | | ||||| || Sbjct 45879 ATTGTCGAGAAAATCATCACCGAAGCTGTCAACATTGAAAAAGACTACTTTACCGACGCC 45820 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTC 117349 |||| || || |||| | || ||| || ||||| |||||| | || ||| | Sbjct 45819 TTGCCAGTTTCCTTGTTGGGCATGAACTGCAAATTGATGTGTCAATACGTGGAATTCTGC 45760 Query 117350 GCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTG 117409 |||||||| || || ||| ||| | |||| |||||| |||| || | Sbjct 45759 GCCGACAGATTGTTGGTCGCCTTGGGTAACAACAAGGTTTACAACGTTACCAATCCATTT 45700 Query 117410 GACTTTATGAACCTCATCTCCTTGG 117434 || |||||| | ||| ||||||| Sbjct 45699 GATTTTATGGAAAACATTTCCTTGG 45675 >seq4 Length=1632271 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| ||||| || || || |||||||| ||| | || || || || Sbjct 76710 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAAACCATTACCTTGGAAGTGGAGTCC 76651 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||| || |||| |||||||| || || || | ||| Sbjct 76650 TCGGACACCATTGACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATTCCACCAGAC 76591 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||| || | |||| || || || ||| |||| |||| | ||| | ||||||| Sbjct 76590 CAACAAAGATTGATCTTTGCTGGTAAGCAGTTGGAAGACGGCAGAACCTTGTCCGACTAC 76531 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||||| |||| |||| Sbjct 76530 AACATCCAAAAGGAATCCACTTTGCA 76505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218916629440