Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 >seq1 Length=3127730 Score = 143 bits (158), Expect = 2e-29 Identities = 414/630 (66%), Gaps = 29/630 (5%) Strand=Plus/Minus Query 96964 TTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGA 97023 || |||||||||||| | || ||||| || ||| | |||| || || ||| Sbjct 2169300 TTGAAATCATCAATATCAGTAACGTTTCTTTTAATCTTCAACTTTGGAAAGCTTCTTGGA 2169241 Query 97024 GTTCGCGTAAGCTGCTCT-GTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCC 97082 || ||| |||||| || || || |||||||| | | || | ||| || || || Sbjct 2169240 ACTCTGTTAATTTGCTCTTGTAAG-GCTTCAATGTGGTCCTTGTACACGTGGGCGTCACC 2169182 Query 97083 TAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAA 97142 | ||||| || || || ||| | | ||| || ||||| ||||| |||| Sbjct 2169181 CATGGTGTGTATGAACTCACCACAGTCCATGTCACACACCTGGGCAATCATCTTGGTTAG 2169122 Query 97143 TAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATA 97202 |||| ||| ||||| || ||||| || || | |||||||| ||||| || || Sbjct 2169121 AAGAGCATACGACGCAATATTGAAAGGAACACCCAAGCCCATATCGCAAGATCTCTGGTA 2169062 Query 97203 TAACTGACAGGAAAGCT------TTCCATC------ACAC---ACATAAAACTGACTCAA 97247 || |||| || |||| | ||||| | | ||||| |||||||| || Sbjct 2169061 TAGGAGACACGAGAGCTGAGGTCTGCCATCTTTAGGAAAGTTTACATAGAACTGACTAAA 2169002 Query 97248 TACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAA 97307 ||||| || || || | |||||| || || | |||| ||||||||| |||| | Sbjct 2169001 CACATGGCAAGGAGGAAGCGCCATCTTAGGGAAATCTGGTGGGTTCCAAGCAGACATGAT 2168942 Query 97308 CATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAAC 97367 |||||||||||| ||||| || | | ||| || | || | ||||||||| || Sbjct 2168941 GATTCTTCTATCGTACGGGTTGGTCTTCAATTTATGGATAACCTCCGCTAATTGATCCAC 2168882 Query 97368 GCCTTCTCCACCATAATTGTGCTTAAGA--CCTTGATATTCTGCTCCAAAATGCCTCCAT 97425 ||||| ||| ||| | | || | | | |||| ||||||||||||||||| ||||| Sbjct 2168881 GCCTTGGCCATTATAGTCG-GCATCACAATTCTTG-TATTCTGCTCCAAAATGTCTCCAC 2168824 Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTC----TTCTCTATCACAGAAACCAAGCTT 97481 ||||| ||||||||||| || | || || || |||| | || || |||| | Sbjct 2168823 TGGAACCCATAAACAGGACCTAAATCGCCCTCTCTATTCTTTGTC----AACCCAATACT 2168768 Query 97482 ATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTC 97541 |||| ||| || ||||||| | ||||| || | || || | | | ||||| Sbjct 2168767 GTCTAGATACTCTCTGCTTCCATTTCCTTCCCAGATCTTAACGCCCTGTTCCGAAAGCTT 2168708 Query 97542 TTTGCTGTCAGTAGATCCTCTGATAAACCA 97571 |||| |||||| | || | |||||||| Sbjct 2168707 CTTGCCGTCAGTGCAGCCCTTAATAAACCA 2168678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783814037080