Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq5 262 4e-65 seq10 154 1e-32 >seq5 Length=1624186 Score = 262 bits (290), Expect = 4e-65 Identities = 594/880 (68%), Gaps = 25/880 (3%) Strand=Plus/Minus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 |||||||| || |||||| || || || ||||| || |||||| | || || || ||| Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAAT 16063 ||||| |||||||||||||| || ||| ||||| | || || | || Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAGGATACTAAC 610577 Query 16064 AATCTATCCGCCACAAATTCTATATACTGTTTCATTAAA-TCACAGTTCATTCCTATTAA 16122 || | || || ||||| || | ||| || ||||||||| | || |||||||||| || Sbjct 610576 AACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCA-TTCATTCCTAACAA 610518 Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182 |||| | || || ||| | || ||||||||| ||| ||||| |||| || Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458 Query 16183 ATCTCTTACTACA--CTATTTAACGGAGG-GTTT----AATAAGTGTTTAAACATTATAC 16235 | || | ||| || |||| | | |||| ||| || || ||| || || Sbjct 610457 TT---TTTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGAGAGT----ACAATAGAC 610405 Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295 | ||||||||| |||||| ||||||||||| || || |||||||| ||||| || | || Sbjct 610404 ACGCAAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAAC 610345 Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355 ||||||| || |||| |||||| | |||||| || | ||||| || || || || |||| Sbjct 610344 CTGGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATA 610285 Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttcta 16415 | ||||| || || ||||| ||||| | || || | || || | | | Sbjct 610284 TTCCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGA 610225 Query 16416 tccattttttagcccaatttgctttttgtttAA--CACAGTTCATGTTCTCTATTGCATT 16473 |||| | |||||| | ||||| | ||| | | | || || | || || ||||| Sbjct 610224 TCCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGT--ATAGTTTCGATGGCATT 610167 Query 16474 AAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACAT 16533 || || | | | ||||| |||| |||||||||||||| ||||| ||| | Sbjct 610166 GAACAAGAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGT 610107 Query 16534 TTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATAT 16593 || ||||| || || ||||| ||| ||||| ||||| |||||| | || ||| | Sbjct 610106 CTCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCAC 610047 Query 16594 TTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGC 16653 ||| || || | |||| ||| ||| ||||| || || || || || || || || Sbjct 610046 TTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGC 609987 Query 16654 AAAAAACGC-AAGTATGTGTTTAATAAAAtttttttCGTTATC-TGAAAGTTTTAA--CC 16709 ||||||||| || | || | || |||| || ||| | || || ||| || Sbjct 609986 AAAAAACGCTAAAACTCTGGAT-ATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCC 609928 Query 16710 AGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769 | ||| | | ||||||| |||||| | |||||| ||||||| ||||| || | |||| Sbjct 609927 AATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCT 609868 Query 16770 TTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAA 16809 |||||||||| | ||| || || | ||| |||||||| Sbjct 609867 TTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAA 609828 >seq10 Length=744508 Score = 154 bits (170), Expect = 1e-32 Identities = 307/450 (68%), Gaps = 16/450 (4%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 |||||||| ||| ||||| ||||| || || || |||||||| | || ||||| ||| Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACAATAGTA---TTTATCGCATCCCAATTCCAAC 16060 |||||||||||||| ||||| | ||| | ||| || | | ||||| | | | Sbjct 45689 TCCATAAAATCAAATGGATTGGT--AAC-GTTGTAAACCTTGTTGTTACCCAAGGCGACC 45745 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 || ||||| || || ||||| | || || ||| || | |||||||| || | Sbjct 45746 AACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAAC 45805 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 || ||| || | || || || || | | |||||| || || || ||||| |||| Sbjct 45806 AAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATG 45865 Query 16181 ATATCTCTTACTACACTATTTAACGG-AGGGTTTAAT----AAGTGTTTAAACATTATAC 16235 || || || || |||| || ||||| | ||||| ||||| | | Sbjct 45866 AT-----TTTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGC 45920 Query 16236 AAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGAC 16295 ||||||| || ||||| |||||||| || | || || ||||| ||||| || | | Sbjct 45921 AAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGC 45980 Query 16296 CTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATA 16355 | ||||| | |||| |||||| | ||| || |||| ||||| || || || ||||| | Sbjct 45981 CCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAA 46040 Query 16356 TACCTTCAACTGCGGCAAATGCAACCAATC 16385 | |||||||| || ||||| |||||||||| Sbjct 46041 TGCCTTCAACAGCAGCAAAGGCAACCAATC 46070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511745618400