Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 122 7e-23 >seq1 Length=3127730 Score = 122 bits (134), Expect = 7e-23 Identities = 374/577 (65%), Gaps = 25/577 (4%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| || || || || || |||||||| || ||| || | ||| | | ||| Sbjct 2168621 TTTCCTTTGTTGACCACCAAGAAGGTATTTTCCAAGGGCATTATCTTGGAGCTTCTTTGG 2168680 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 |||||||| || | || | | ||||| ||| | || |||||||| ||| Sbjct 2168681 TTTATTAAGGGCTGCACTGACGGCAAGAAGCTTTCGGAACAGGGCGTTAAGATCTGGGAA 2168740 Query 20164 GCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCA-AGAGGGGGA 20222 | | ||||| | | | | || |||| | ||| || ||||| | |||||| || Sbjct 2168741 GGAAATGGAAGCAGAGAGTATCTAGACAGTATTGGGTT-GACAAAGAATAGAGAGGGCGA 2168799 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATA----TGTTGACA 20278 ||| |||||||| ||||| || || ||||||||||||||||| ||||| ||| | Sbjct 2168800 TTTAGGTCCTGTTTATGGGTTCCAGTGGAGACATTTTGGAGCAGAATACAAGAATTGTGA 2168859 Query 20279 TGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTA 20338 || | | ||| ||| ||||| || ||||||||| | ||||| || | | | Sbjct 2168860 TG----CCGACTATAATGGCCAAGGCGTGGATCAATTAGCGGAGGTTATCCATAAATTGA 2168915 Query 20339 AAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTT 20398 | || ||||| |||| |||||||| || | | || |||||| | |||| | ||| Sbjct 2168916 AGACCAACCCGTACGATAGAAGAATCATCATGTCTGCTTGGAACCCACCAGATTTCCCTA 2168975 Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTT------ACGTTGCTAATAATG 20452 ||||| | ||||| || ||| || | | || || | || || |||| ||| Sbjct 2168976 AGATGGCGCTTCCTCCTTGCCATGTGTTTAGTCAGTTCTATGTAAACTTTCCTAAAGATG 2169035 Query 20453 ---------AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTC 20503 | | ||||||| | || || |||| |||||||| ||||||||| Sbjct 2169036 GCAGACCTCAGCTCTCGTGTCTCCTATACCAGAGATCTTGCGATATGGGCTTGGGTGTTC 2169095 Query 20504 CTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAA 20563 ||||||||||||| ||||| || || || | |||||||| || || || | Sbjct 2169096 CTTTCAATATTGCGTCGTATGCTCTTCTAACCAAGATGATTGCCCAGGTGTGTGACATGG 2169155 Query 20564 AAACGGGTGACTTAGTCCACACCATAGGAGACGCGCA 20600 | ||||| || | |||||||| || ||||| || Sbjct 2169156 ACTGTGGTGAGTTCATACACACCATGGGTGACGCCCA 2169192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183785937580