Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq5 253 2e-62 seq10 132 5e-26 >seq5 Length=1624186 Score = 253 bits (280), Expect = 2e-62 Identities = 611/915 (67%), Gaps = 15/915 (2%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| || ||||||||| || || || || || || ||| ||| || || ||| Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| |||||||| ||||| ||| || | | | ||||||| ||||| || || Sbjct 610636 TCCATGAAATCAAAAGGATT-GTTCACGTTATATACTTTATTGTTACCTAAGGATACTAA 610578 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 || | || |||| ||||| | |||||| ||||||| |||||| |||| | Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAA 610518 Query 14092 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 14151 ||||| || | ||| ||| |||||||||| ||||| ||| | || || Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458 Query 14152 AATCGTAATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCA 14209 | || ||| | ||| | | |||| | ||| | | || ||||||| Sbjct 610457 TTTTTCAACAATCTTTTTATCC--AATTTGTTTTGCAAATGAGAGTACAATAGACACGCA 610400 Query 14210 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 14269 |||||| ||| | ||| || || || ||||| | ||||| ||||| || || |||||| Sbjct 610399 AAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGC 610340 Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329 || | |||| |||||| |||||||| |||| ||| || ||||| || || |||||||| Sbjct 610339 ATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCT 610280 Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCA 14388 || || |||||||| || | | |||||| ||||| | || || | || || | ||||| Sbjct 610279 TCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGT-CGTTGATCCA 610221 Query 14389 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | |||||| |||| ||| | ||| || || ||||| || ||||| || || Sbjct 610220 ACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACAA 610161 Query 14449 ATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 14508 ||| |||||| | | || || ||||| ||||||||| ||| | || || Sbjct 610160 GAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGGA 610101 Query 14509 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTAC 14568 |||||||||||||| ||| ||||| ||||| || ||| | || || | ||| || Sbjct 610100 ATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCAC 610041 Query 14569 CTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14628 ||||| |||| ||| | | ||||||||| || || || ||||| || |||||||| Sbjct 610040 CTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAAA 609981 Query 14629 TGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTT---TTTCCAATCGGC 14685 || || | | || || || |||| ||| | | || || |||||||| Sbjct 609980 CGCTAAAACTCTGGATATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATCATA 609921 Query 14686 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATA 14745 || ||| || | ||| | || || | ||||| ||| || | || |||||||| Sbjct 609920 TATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTTATA 609861 Query 14746 CATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAAT--CTTGAAGATGTTTCT 14803 ||| ||| || || | || |||||||||| |||||| |||| | | || Sbjct 609860 CATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCGCTTG--GTATTCTCC 609803 Query 14804 TTAAGAATTGGTTCC 14818 ||||||| ||| ||| Sbjct 609802 TTAAGAAGTGGCTCC 609788 >seq10 Length=744508 Score = 132 bits (146), Expect = 5e-26 Identities = 475/730 (65%), Gaps = 16/730 (2%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 |||||||| ||| ||||||||||| || ||||| ||||| || ||| || || ||| Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 13973 TCCATAAAATCAAATGGATTTGT--TGACATAAACACTTTATCACAACCTAGTTCTAATA 14030 |||||||||||||||||||| || | ||||| ||| | | || || | | | Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAAC-CTTGTTGTTACCCAAG-GCGACCA 45746 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 ||||| || || ||| || | |||||| |||| || | || ||||| || | | Sbjct 45747 ACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACA 45806 Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 || || | | ||| || | |||||||| || ||||| ||| | || | Sbjct 45807 AGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGA 45866 Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 14210 | || | |||||| || | | | || ||| | || || |||| Sbjct 45867 TTTTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAA 45926 Query 14211 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 14270 | || || | || || ||||| | || | |||||| ||||| || || || |||| Sbjct 45927 AGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCA 45986 Query 14271 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 14330 |||| |||| |||||| ||||| || || | ||| || || || || ||||| || || | Sbjct 45987 TCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTT 46046 Query 14331 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCAT 14389 |||| |||||||| || | |||| ||| ||||| | || | | | ||| | |||||| Sbjct 46047 CAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGGTCG-TCGTTGATCCAT 46105 Query 14390 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14449 | ||||| || | |||| || || ||||| ||||| ||||| || ||| Sbjct 46106 CTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAAA 46165 Query 14450 TGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTCA 14506 || ||| ||| || ||||| | || || ||||| | | ||| | || |||| Sbjct 46166 AACTCAGACTCCTTAGGGTCCTTGACA--TACGTGTCAATCAAT-AGCGAGTATGTTTCC 46222 Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT--GACCATT 14564 || || || || ||||| ||||| || || || ||| | | || ||| |||| | Sbjct 46223 GAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACC--T 46280 Query 14565 GTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAA 14624 | || || | |||| | || |||| || || || || || || || || |||| Sbjct 46281 GAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAA 46340 Query 14625 AAAATGCCAA 14634 |||| ||||| Sbjct 46341 AAAACGCCAA 46350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345334709920