Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1 125 5e-24 seq4 98.7 8e-16 >seq1 Length=3127730 Score = 125 bits (138), Expect = 5e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 |||||| |||| ||| | || || || ||||||||||||||||| | || ||| ||| Sbjct 1884752 TCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1884693 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| |||||||| || ||| | || | |||||||||||| || | |||||||| Sbjct 1884692 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1884633 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||| | | |||||| | ||| ||||||| || || ||| | ||||| Sbjct 1884632 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1884573 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 | | || || ||||| || || ||||| ||||||||| Sbjct 1884572 GGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATT 1884536 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 |||||| |||| ||| | || ||||| ||||||||||||||||| | || ||| ||| Sbjct 1885208 TCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1885149 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| |||||||| || ||| | || | |||||||||||| || | |||||||| Sbjct 1885148 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1885089 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||| | | |||||| | ||| ||||||| || || ||| | ||||| Sbjct 1885088 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1885029 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | | || || ||||| || || || || |||||||| Sbjct 1885028 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 |||||| |||| ||| | || || || ||||||||||||||||| | || ||| ||| Sbjct 1884980 TCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACC 1884921 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| |||||||| || ||| | || | |||||||||||| || | |||||||| Sbjct 1884920 ATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTT 1884861 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||| | | |||||| | ||| ||||||| || || ||| | ||||| Sbjct 1884860 GTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGAT 1884801 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | | || || ||||| || || || || |||||||| Sbjct 1884800 GGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765 >seq4 Length=1632271 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 ||| || |||| ||| | || ||||| ||||| ||||||||||||| || ||| | | Sbjct 76492 TCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCC 76551 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||||| || || || ||| |||| | ||||||||| || || | ||||| || Sbjct 76552 GTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTT 76611 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||| | ||||| | ||| ||||| || ||| ||| | ||| || Sbjct 76612 GTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAAT 76671 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 | |||| ||||| | ||||| || ||||||||||| || Sbjct 76672 GGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 76710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343796576780