Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 248 8e-61 seq10 125 7e-24 >seq5 Length=1624186 Score = 248 bits (274), Expect = 8e-61 Identities = 595/883 (67%), Gaps = 28/883 (3%) Strand=Plus/Minus Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397 ||||||||| || ||||| | ||||||||||| ||||| ||| | | || || | Sbjct 610697 CTTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTT 610638 Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457 ||||| || ||||||||| | || || | ||||| | |||||| | ||| Sbjct 610637 TTCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAGGATACTAA 610578 Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAA- 11516 || | || || || || || | ||| || ||||||| |||||| |||| | Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAA 610518 Query 11517 -GATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATT 11575 ||| || | || ||| | ||| | | |||||||||| ||| || || |||| Sbjct 610517 GGATACA--GAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATG 610460 Query 11576 ATCGACGTTATAACT-TCCTTAGATGGTGGATGTAAT--AAATGTTTAAACATTAAACAC 11632 || || ||| || || || ||| | ||||| ||| || |||| Sbjct 610459 ATTT---TTTCAACAATCTTTTTATCCAATTTGTTTTGCAAATGAGAGTACAATAGACAC 610403 Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 ||||||||| ||| || |||||||| || || || | || |||||||| || || || Sbjct 610402 GCAAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCT 610343 Query 11693 GGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATT 11752 ||||| | |||| |||||| | |||||| || | |||||| || || || || |||||| Sbjct 610342 GGCATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATT 610283 Query 11753 CCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTTGTTGCTAGAT-AT 11808 || || || || ||||| || || | | |||| || | | | |||| | | | | || Sbjct 610282 CCTTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCG-TCGTTGAT 610224 Query 11809 CCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAA 11868 ||| | ||||| |||||||||| ||| | || || ||||| || || || || Sbjct 610223 CCAACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAA 610164 Query 11869 TAAATGCATTTT--TTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATT 11926 || | ||| | ||| | | |||| | | ||| |||||||| | ||| ||| | Sbjct 610163 CAA--GAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTC 610106 Query 11927 TCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC 11986 || ||||| || |||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct 610105 TCGGAATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTC-GCTCAC 610047 Query 11987 -TGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGC 12045 || || || | |||| ||| | ||| ||| ||||| ||||| || ||||| | || Sbjct 610046 TTGCACCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGC 609987 Query 12046 AAAAAATGCTAGTA-TATGTTTTATAAAGTATTTTTCGTCTTTAGTTAA----TTTATCC 12100 |||||| |||| | | || ||| || || || | | ||||| | || | Sbjct 609986 AAAAAACGCTAAAACTCTG-GATATGAAATACCGCTC-ACCATCGTTAAGCTTGTAATTC 609929 Query 12101 CAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGAT 12160 ||||||| || ||||||| |||||| | ||||| | ||||| ||| |||| ||| Sbjct 609928 CAATCATATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCC 609869 Query 12161 TGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAA 12203 | ||||||||| | ||| || ||||| ||||| ||||| |||| Sbjct 609868 TTTTTATACATCTGCCAAATCTCATGGTACTTGATAGGAAAAA 609826 >seq10 Length=744508 Score = 125 bits (138), Expect = 7e-24 Identities = 293/439 (67%), Gaps = 5/439 (1%) Strand=Plus/Plus Query 11620 AAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGA 11679 ||||| || || ||||| || || |||||||||||||| | || | ||| ||||| Sbjct 45910 AAACAACAAGCAAGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGA 45969 Query 11680 AAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACC 11739 ||| || || || |||||||| |||| |||||| | ||| || |||| |||||| || || Sbjct 45970 AAACGTCAAGCCCGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCC 46029 Query 11740 AGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA---CCTT 11796 || ||||| || || || ||||| ||||| || || | |||||| || | | ||| Sbjct 46030 CGAGAAGAAAATGCCTTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTG 46089 Query 11797 GTTGCTAGAT-ATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTT 11855 || | | | | |||||| | |||||| || || || | || | | ||||| | Sbjct 46090 GTCG-TCGTTGATCCATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCT 46148 Query 11856 CTATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATA 11915 | || || || || ||| | || || || | ||||| || || || |||| Sbjct 46149 CAATGGCATTGAACAAAAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATA 46208 Query 11916 AACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTG 11975 || |||| ||||| ||||| ||||| || || || || |||||| | | Sbjct 46209 GCGAGTATGTTTCCGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGG 46268 Query 11976 CCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCAT 12035 |||||| ||| || || || |||| | ||| | || ||||| || ||||| || | Sbjct 46269 CCTCTGGGACCTGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGT 46328 Query 12036 CACTAGATGCAAAAAATGC 12054 | | |||||||| || Sbjct 46329 CCGACGCAGCAAAAAACGC 46347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524542311360