Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq10 100 2e-16 seq5 98.7 7e-16 >seq10 Length=744508 Score = 100 bits (110), Expect = 2e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| |||||||||||| | | || || || || ||||| | || |||||| || Sbjct 46062 GCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCGGGCTCTTTTGCTTCTATTTTCTGGTTG 46003 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 || ||| | | ||||| || ||| ||||||| ||||| ||||| || | |||||| Sbjct 46002 AAAAAAAGAGGTTTGATGCCGGGCTTGACGTTTTCTAACGAATTGATCTGCAGAGACGAA 45943 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGttt 22902 ||| | ||| ||||||||||| || ||||| Sbjct 45942 GGTTTGCACACCGACTTTGCTTGCTTGTTGTTT 45910 >seq5 Length=1624186 Score = 98.7 bits (108), Expect = 7e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||||| | |||||||| || || ||||| | | || || || || ||||| | || Sbjct 610253 ACGTCTTGTTGCCTTTGCTGCCGTAGAAGGAATATTTTTCTCAGGATCGTTTGCTTCAAT 610312 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 || ||| |||| ||| | ||||||||||| ||| ||||||| |||||||||||||| Sbjct 610313 CTTTTGGTTGAAAAAAAGAGGTCTCATGCCAGGTTTGACGTTTTCTAACGAGTTGATTAG 610372 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGT 22893 | | |||||||| | || ||| ||||| ||| Sbjct 610373 CAGGGACGAAGGCTTGCATACTGATTTTGCGTGT 610406 Score = 82.4 bits (90), Expect = 5e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 33577 ATGGGCGACAAGTTTGCATCGTT-CACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || |||||||||||||| ||| ||||||| ||||||| || ||| || | |||| Sbjct 1196850 ATCGGCGACAAGTTTGCGTCGCGACACGGCC-AGAAGGGAACCATCGGAATTACGTACCG 1196792 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 || |||||||||||||| ||||| ||| | || || || || || ||||| || || Sbjct 1196791 GCACGAAGACATGCCGTTCACTGCCGAGGGCATTGTGCCCGATCTCGTGATCAATCCACA 1196732 Query 33696 TGCGTTCCCCTCGCGCATGACGGT 33719 || | || ||||| ||||| || Sbjct 1196731 CGCCATTCCGTCGCGGATGACCGT 1196708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233408969732