Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq4 96.9 3e-15
seq5 93.3 4e-14
seq6 86.0 6e-12
seq1 86.0 6e-12
>seq4
Length=1632271
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||| | || || || ||||| ||||| || ||| || || || ||||||
Sbjct 76499 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCC 76558
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
| ||| ||||||||| |||||| | ||| || || || || || ||||||||||| ||
Sbjct 76559 AACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTC-TTG 76617
Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
| | || | ||| | | || | ||||| | || |||||| || | ||| | || ||
Sbjct 76618 AATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTT 76677
Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| | ||||| ||||| ||||||||
Sbjct 76678 ACCGGTAAGGGTTTTGACGAAAATTTGCAT 76707
>seq5
Length=1624186
Score = 93.3 bits (102), Expect = 4e-14
Identities = 254/385 (66%), Gaps = 17/385 (4%)
Strand=Plus/Plus
Query 52572 TGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGC 52631
||| ||||| || |||||| | ||||||| || ||||| |||||||| || ||
Sbjct 610205 TGACTGGGCTTTACGTTGGATCAACGACGACAACGCTTTGTTTGCAGAACGTCTTGTTGC 610264
Query 52632 GTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA 52691
|||||| || ||||| | ||||| || || ||||| |||| |||| | ||
Sbjct 610265 CTTTGCTGCCGTAGAAGGAATATTTTTCTCAGGATCGTTTGCTTCAATCTTTTGGTTGAA 610324
Query 52692 AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGC-GCGACGAAG 52750
|| || | ||||| || | |||||| ||||||||||| | || | |||||||
Sbjct 610325 AAAAAGAGGTCTCATGCCAGGTTTGACGTTTTCTAACGAGTTGAT-TAGCAGGGACGAAG 610383
Query 52751 GAATGCACACAGATTTTGCGTGT---TTGTATTATAATACGCGCGTTAAAGAAAAATTGT 52807
| |||| || |||||||||||| ||||| | | || || || | ||||||
Sbjct 610384 GCTTGCATACTGATTTTGCGTGTCTATTGTACTCTCATTTGC------AAAACAAATTG- 610436
Query 52808 CATATGAAAAAATTCT---AGACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTT 52864
|| |||| ||| | | | || | | || || || | || ||||| | | ||
Sbjct 610437 --GATAAAAAGATTGTTGAAAAAATCATCACCGAAGCTGTTGCTATAGAAAAGAAATATT 610494
Query 52865 TTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACA 52924
| |||||| | | ||||| ||||| || ||||| || || | ||| | | ||
Sbjct 610495 TCGATGACGCTCTTTCTGTATCCTTGTTAGGAATGAATGCCACTTTAATGAACCAATATG 610554
Query 52925 TCGAGTTTGTTGCGGACAGACTGTT 52949
| ||||||||||| ||| | ||||
Sbjct 610555 TGGAGTTTGTTGCCGACCGGTTGTT 610579
>seq6
Length=1504906
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| || | |||||| ||||| | || || || |||||||| || || || |
Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| | || ||||||||| |||||| | ||| ||||| || ||
Sbjct 99637 AAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 99578
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| | || | ||| | | || | ||||||| | || ||
Sbjct 99577 ATACCTTCTTTGTC-TTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 99519
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755
|| | ||| | ||||| || ||||| ||||| |||||
Sbjct 99518 TTCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAA 99480
>seq1
Length=3127730
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||| | || ||||| ||||||||||| || || || || || |||||
Sbjct 1884973 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884914
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
| |||||||||||| | |||| | ||| ||||| || || || ||||| ||||| ||
Sbjct 1884913 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTC-TTG 1884855
Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
| | |||| || | | || | ||||| | || || || || | || | |||||
Sbjct 1884854 AATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTT 1884795
Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| ||||| || || ||||| |||||||||
Sbjct 1884794 ACCAGTCAAGGTCTTAACGAAGATTTGCATA 1884764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063727164800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |