Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 3e-15 seq5 93.3 4e-14 seq6 86.0 6e-12 seq1 86.0 6e-12 >seq4 Length=1632271 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || || || ||||| ||||| || ||| || || || |||||| Sbjct 76499 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTGCCGTCTTCC 76558 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | ||| ||||||||| |||||| | ||| || || || || || ||||||||||| || Sbjct 76559 AACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATACCTTCTTTGTC-TTG 76617 Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 | | || | ||| | | || | ||||| | || |||||| || | ||| | || || Sbjct 76618 AATCTTGGATTTGACATTGTCAATGGTGTCCGAGGACTCCACTTCCAAGGTAATGGTTTT 76677 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||||| ||||| |||||||| Sbjct 76678 ACCGGTAAGGGTTTTGACGAAAATTTGCAT 76707 >seq5 Length=1624186 Score = 93.3 bits (102), Expect = 4e-14 Identities = 254/385 (66%), Gaps = 17/385 (4%) Strand=Plus/Plus Query 52572 TGATTGGGCATTGAAATGGATCGAAAACGACAAAGCCACTTTTGCCGAACGTCTGGTCGC 52631 ||| ||||| || |||||| | ||||||| || ||||| |||||||| || || Sbjct 610205 TGACTGGGCTTTACGTTGGATCAACGACGACAACGCTTTGTTTGCAGAACGTCTTGTTGC 610264 Query 52632 GTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGTTTTGCGGCAATATTTTACATCAA 52691 |||||| || ||||| | ||||| || || ||||| |||| |||| | || Sbjct 610265 CTTTGCTGCCGTAGAAGGAATATTTTTCTCAGGATCGTTTGCTTCAATCTTTTGGTTGAA 610324 Query 52692 AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATATCGC-GCGACGAAG 52750 || || | ||||| || | |||||| ||||||||||| | || | ||||||| Sbjct 610325 AAAAAGAGGTCTCATGCCAGGTTTGACGTTTTCTAACGAGTTGAT-TAGCAGGGACGAAG 610383 Query 52751 GAATGCACACAGATTTTGCGTGT---TTGTATTATAATACGCGCGTTAAAGAAAAATTGT 52807 | |||| || |||||||||||| ||||| | | || || || | |||||| Sbjct 610384 GCTTGCATACTGATTTTGCGTGTCTATTGTACTCTCATTTGC------AAAACAAATTG- 610436 Query 52808 CATATGAAAAAATTCT---AGACATGTTTAAAGAGGCCGTCGACATTGAAAAAGAGTTTT 52864 || |||| ||| | | | || | | || || || | || ||||| | | || Sbjct 610437 --GATAAAAAGATTGTTGAAAAAATCATCACCGAAGCTGTTGCTATAGAAAAGAAATATT 610494 Query 52865 TTACGGACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCATGATGTGCGAGTACA 52924 | |||||| | | ||||| ||||| || ||||| || || | ||| | | || Sbjct 610495 TCGATGACGCTCTTTCTGTATCCTTGTTAGGAATGAATGCCACTTTAATGAACCAATATG 610554 Query 52925 TCGAGTTTGTTGCGGACAGACTGTT 52949 | ||||||||||| ||| | |||| Sbjct 610555 TGGAGTTTGTTGCCGACCGGTTGTT 610579 >seq6 Length=1504906 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| || | |||||| ||||| | || || || |||||||| || || || | Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | || ||||||||| |||||| | ||| ||||| || || Sbjct 99637 AAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 99578 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| | || | ||| | | || | ||||||| | || || Sbjct 99577 ATACCTTCTTTGTC-TTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAAC 99519 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755 || | ||| | ||||| || ||||| ||||| ||||| Sbjct 99518 TTCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAA 99480 >seq1 Length=3127730 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || ||||| ||||||||||| || || || || || ||||| Sbjct 1884973 ACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGGTTCTACCATCTTCT 1884914 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | |||||||||||| | |||| | ||| ||||| || || || ||||| ||||| || Sbjct 1884913 AATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGAATACCTTCCTTGTC-TTG 1884855 Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 | | |||| || | | || | ||||| | || || || || | || | ||||| Sbjct 1884854 AATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACTTCCAAAGTGATGGTCTT 1884795 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || ||||| || || ||||| ||||||||| Sbjct 1884794 ACCAGTCAAGGTCTTAACGAAGATTTGCATA 1884764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063727164800