Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq5 268 9e-67 seq10 118 1e-21 >seq5 Length=1624186 Score = 268 bits (296), Expect = 9e-67 Identities = 612/913 (67%), Gaps = 11/913 (1%) Strand=Plus/Minus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 |||||||| || ||||||||| || || || || || || ||| ||| || || ||| Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699 ||||| |||||||| ||||| || || | | | ||||||| ||||| || || Sbjct 610636 TCCATGAAATCAAAAGGATTG-TTCACGTTATATACTTTATTGTTACCTAAGGATACTAA 610578 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 || | || |||| |||||| | |||||| ||||||| |||||| |||| | Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAA 610518 Query 13760 TTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAAT 13819 ||||| || | ||| ||| |||||||||| ||||| || | || || Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458 Query 13820 AATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCA 13877 || || ||||| ||| | | |||| | ||| | | || ||||||| Sbjct 610457 TTTTTCAACAATCTTTTTATCC--AATTTGTTTTGCAAATGAGAGTACAATAGACACGCA 610400 Query 13878 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13937 |||||| ||| | ||| || || || ||||| | ||||| ||||| || || |||||| Sbjct 610399 AAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGC 610340 Query 13938 ATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCC 13997 || | |||| |||||| |||||||| |||| |||||| || || || || |||||||| Sbjct 610339 ATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCT 610280 Query 13998 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCA 14056 || || |||||||| || | | |||||| ||||| | || || | || || | ||||| Sbjct 610279 TCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGT-CGTTGATCCA 610221 Query 14057 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | |||||| |||| ||| | ||| || || ||||| || ||||| || || Sbjct 610220 ACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACAA 610161 Query 14117 ATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGA 14176 |||| |||||| | | || || ||||| ||||||||| ||| | || || Sbjct 610160 GAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGGA 610101 Query 14177 GTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTAC 14236 |||||||||||||| ||| ||||| ||||| |||||| | || || | ||| || Sbjct 610100 ATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCAC 610041 Query 14237 TTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAA 14296 || | |||| ||| | | ||||||||| || || || ||||| || |||||||| Sbjct 610040 CTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAAA 609981 Query 14297 TGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT---TTTCCAATCGGA 14353 || || | | || || || |||| ||| ||| || || |||||||| | Sbjct 609980 CGCTAAAACTCTGGATATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATCATA 609921 Query 14354 TAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATA 14413 || ||| || | ||| | || || | ||||| ||| || | || |||||||| Sbjct 609920 TATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTTATA 609861 Query 14414 CATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTCGAAGATGTTTCTTT 14473 ||| ||| || || | || |||||||||| ||||||| | | | || || Sbjct 609860 CATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCGCTTGGTATTCTCCTT 609801 Query 14474 AAGAATTGGTTCC 14486 ||||| ||| ||| Sbjct 609800 AAGAAGTGGCTCC 609788 >seq10 Length=744508 Score = 118 bits (130), Expect = 1e-21 Identities = 472/730 (65%), Gaps = 16/730 (2%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 |||||||| ||| ||||||||||| || ||||| ||||| || ||| || || ||| Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 13641 TCCATAAAATCAAATGGATT--TATTGACATAAACACTTTATCACAACCTAGTTCTAATA 13698 |||||||||||||||||||| || | ||||| ||| | | || || | | | Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAAC-CTTGTTGTTACCCAAG-GCGACCA 45746 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 ||||| || || || || | |||||| |||| || | || ||||| || | | Sbjct 45747 ACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACA 45806 Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 || || | | ||| || | |||||||| || ||||| || | || | Sbjct 45807 AGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGA 45866 Query 13819 TAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13878 | | | ||| || || | | | || ||| | || || |||| Sbjct 45867 TTTTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAA 45926 Query 13879 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13938 | || || | || || ||||| | || | |||||| ||||| || || || |||| Sbjct 45927 AGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCA 45986 Query 13939 TCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCT 13998 |||| |||| |||||| ||||| || || | |||||| || || || ||||| || || | Sbjct 45987 TCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTT 46046 Query 13999 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCAT 14057 |||| |||||||| || | |||| ||| ||||| | || | | | ||| | |||||| Sbjct 46047 CAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGGTCG-TCGTTGATCCAT 46105 Query 14058 TTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14117 | ||||| || | |||| || || ||||| ||||| ||||| || ||| Sbjct 46106 CTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAAA 46165 Query 14118 TATTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTCA 14174 | || ||| ||| || ||||| | || || ||||| | | ||| | || |||| Sbjct 46166 AACTCAGACTCCTTAGGGTCCTTGACA--TACGTGTCAATCAAT-AGCGAGTATGTTTCC 46222 Query 14175 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC--CGACCATT 14232 || || || || ||||| ||||| || || || || | | || || |||| | Sbjct 46223 GAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACC--T 46280 Query 14233 GTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAA 14292 | ||||| | |||| | || |||| || || || || || || || || |||| Sbjct 46281 GAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCAA 46340 Query 14293 AAAATGCCAA 14302 |||| ||||| Sbjct 46341 AAAACGCCAA 46350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727736149600