Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq5 284 1e-71
seq10 127 2e-24
>seq5
Length=1624186
Score = 284 bits (314), Expect = 1e-71
Identities = 618/916 (67%), Gaps = 17/916 (2%)
Strand=Plus/Minus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
|||||||| || ||||||||| || ||||| || || || ||| ||| || || |||
Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637
Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487
||||| ||||| || ||||| ||| || | | | ||||||| ||||| || |||
Sbjct 610636 TCCATGAAATCAAAAGGATT-GTTCACGTTATATACTTTATTGTTACCTAAGGATACTAA 610578
Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547
|| | || |||| |||||| | |||||| ||||||| |||||| |||| |
Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAA 610518
Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607
||||| || | | ||| ||| |||||||||| ||||| ||| | || ||
Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458
Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCA 13665
| | || ||| | ||| | | |||| | ||| | | || |||||||
Sbjct 610457 TTTTTCAACAATCTTTTTATCC--AATTTGTTTTGCAAATGAGAGTACAATAGACACGCA 610400
Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725
|||||| ||| | ||| || || || ||||| | ||||| ||||| || || ||||||
Sbjct 610399 AAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGC 610340
Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785
|| | |||| |||||| |||||||| |||| ||| || ||||| || || ||||||||
Sbjct 610339 ATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCT 610280
Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCC 13843
|| || |||||||| || | || |||||| ||||| | || || | || ||||| ||
Sbjct 610279 TCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGAT--CC 610222
Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903
| | |||||| |||| ||| | ||| || || |||||||| |||||||| |
Sbjct 610221 AACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACA 610162
Query 13904 AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963
| ||| |||||| | | || || ||||| ||||||||| ||| | || |
Sbjct 610161 AGAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGG 610102
Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14023
| ||||||||||| || ||| ||||| ||||| || ||| | || || | ||| |
Sbjct 610101 AATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCA 610042
Query 14024 CCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083
|||| | |||| ||| | | |||||||| ||||| || ||||| || |||||||
Sbjct 610041 CCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAA 609982
Query 14084 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT---TTTCCAATCGG 14140
| || || | | || || || |||| ||| ||| || || ||||||||
Sbjct 609981 ACGCTAAAACTCTGGATATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATCAT 609922
Query 14141 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTAT 14200
|| ||| || | ||| | || || | ||||| ||| || | || |||||||
Sbjct 609921 ATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTTAT 609862
Query 14201 ACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAAT--CTTGAAGATGTTTC 14258
|||| ||| || || | || |||||||||| |||||| |||| | | ||
Sbjct 609861 ACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCGCTTG--GTATTCTC 609804
Query 14259 TTTAAGAATTGGCTCC 14274
||||||| |||||||
Sbjct 609803 CTTAAGAAGTGGCTCC 609788
>seq10
Length=744508
Score = 127 bits (140), Expect = 2e-24
Identities = 474/731 (65%), Gaps = 18/731 (2%)
Strand=Plus/Plus
Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428
|||||||| ||| ||||||||||| |||||||| ||||| || ||| || || |||
Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688
Query 13429 TCCATAAAATCGAATGGATTTGT--TGACATAAACACTTTATCACAACCTAGTTCTAATA 13486
||||||||||| |||||||| || | ||||| ||| | | || || | | |
Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAAC-CTTGTTGTTACCCAAG-GCGACCA 45746
Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546
| ||||| || || || || | |||||| |||| || | || ||||| || | |
Sbjct 45747 ACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACA 45806
Query 13547 GTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606
|| || | | || || | |||||||| || ||||| ||| | || |
Sbjct 45807 AGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGA 45866
Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666
| ||| | ||| || || | | | || ||| | || || ||||
Sbjct 45867 TTTTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAA 45926
Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726
| || || | || || ||||| | || | |||||| ||||| || || || ||||
Sbjct 45927 AGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCA 45986
Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786
|||| |||| |||||| ||||| || || | ||| || || || || ||||| || || |
Sbjct 45987 TCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTT 46046
Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCCA 13844
|||| |||||||| || | | || ||| ||||| | || | | || ||| |||||
Sbjct 46047 CAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGGTCGTCGTTG--ATCCA 46104
Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| | ||||| || | |||| || || ||||| || || |||||||| ||
Sbjct 46105 TCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAA 46164
Query 13905 ATGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTC 13961
| || ||| ||| || ||||| | || || ||||| | | ||| | || ||||
Sbjct 46165 AAACTCAGACTCCTTAGGGTCCTTGACA--TACGTGTCAATCAAT-AGCGAGTATGTTTC 46221
Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT--GACCAT 14019
|| || || || || || ||||| || || || ||| | | || ||| ||||
Sbjct 46222 CGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACC-- 46279
Query 14020 TGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCA 14079
|| || || | |||| | || ||||||| || || ||||| || || || |||
Sbjct 46280 TGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCA 46339
Query 14080 AAAAATGCCAA 14090
||||| |||||
Sbjct 46340 AAAAACGCCAA 46350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588536776160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |