Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5 284 1e-71 seq10 127 2e-24 >seq5 Length=1624186 Score = 284 bits (314), Expect = 1e-71 Identities = 618/916 (67%), Gaps = 17/916 (2%) Strand=Plus/Minus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 |||||||| || ||||||||| || ||||| || || || ||| ||| || || ||| Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 ||||| ||||| || ||||| ||| || | | | ||||||| ||||| || ||| Sbjct 610636 TCCATGAAATCAAAAGGATT-GTTCACGTTATATACTTTATTGTTACCTAAGGATACTAA 610578 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 || | || |||| |||||| | |||||| ||||||| |||||| |||| | Sbjct 610577 CAACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCATTCATTCCTAACAA 610518 Query 13548 TTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAAT 13607 ||||| || | | ||| ||| |||||||||| ||||| ||| | || || Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458 Query 13608 AATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACGCA 13665 | | || ||| | ||| | | |||| | ||| | | || ||||||| Sbjct 610457 TTTTTCAACAATCTTTTTATCC--AATTTGTTTTGCAAATGAGAGTACAATAGACACGCA 610400 Query 13666 AAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGC 13725 |||||| ||| | ||| || || || ||||| | ||||| ||||| || || |||||| Sbjct 610399 AAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGGC 610340 Query 13726 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 13785 || | |||| |||||| |||||||| |||| ||| || ||||| || || |||||||| Sbjct 610339 ATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCCT 610280 Query 13786 TCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCC 13843 || || |||||||| || | || |||||| ||||| | || || | || ||||| || Sbjct 610279 TCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGAT--CC 610222 Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903 | | |||||| |||| ||| | ||| || || |||||||| |||||||| | Sbjct 610221 AACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAACA 610162 Query 13904 AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963 | ||| |||||| | | || || ||||| ||||||||| ||| | || | Sbjct 610161 AGAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGG 610102 Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14023 | ||||||||||| || ||| ||||| ||||| || ||| | || || | ||| | Sbjct 610101 AATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCA 610042 Query 14024 CCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083 |||| | |||| ||| | | |||||||| ||||| || ||||| || ||||||| Sbjct 610041 CCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAA 609982 Query 14084 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT---TTTCCAATCGG 14140 | || || | | || || || |||| ||| ||| || || |||||||| Sbjct 609981 ACGCTAAAACTCTGGATATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATCAT 609922 Query 14141 CTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTAT 14200 || ||| || | ||| | || || | ||||| ||| || | || ||||||| Sbjct 609921 ATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTTAT 609862 Query 14201 ACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAAT--CTTGAAGATGTTTC 14258 |||| ||| || || | || |||||||||| |||||| |||| | | || Sbjct 609861 ACATCTGCCAAATCTCATGGTACTTGATAGGAAAAAGCACAAATCGCTTG--GTATTCTC 609804 Query 14259 TTTAAGAATTGGCTCC 14274 ||||||| ||||||| Sbjct 609803 CTTAAGAAGTGGCTCC 609788 >seq10 Length=744508 Score = 127 bits (140), Expect = 2e-24 Identities = 474/731 (65%), Gaps = 18/731 (2%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 |||||||| ||| ||||||||||| |||||||| ||||| || ||| || || ||| Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 13429 TCCATAAAATCGAATGGATTTGT--TGACATAAACACTTTATCACAACCTAGTTCTAATA 13486 ||||||||||| |||||||| || | ||||| ||| | | || || | | | Sbjct 45689 TCCATAAAATCAAATGGATTGGTAACGTTGTAAAC-CTTGTTGTTACCCAAG-GCGACCA 45746 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 | ||||| || || || || | |||||| |||| || | || ||||| || | | Sbjct 45747 ACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAACA 45806 Query 13547 GTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606 || || | | || || | |||||||| || ||||| ||| | || | Sbjct 45807 AGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGATGA 45866 Query 13607 TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAA 13666 | ||| | ||| || || | | | || ||| | || || |||| Sbjct 45867 TTTTCTCGACAATTTCCGGGTCTGGTTTGTTCTGCAAGTGAGAAAACAACAAGCAAGCAA 45926 Query 13667 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCA 13726 | || || | || || ||||| | || | |||||| ||||| || || || |||| Sbjct 45927 AGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCCCGGCA 45986 Query 13727 TCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCT 13786 |||| |||| |||||| ||||| || || | ||| || || || || ||||| || || | Sbjct 45987 TCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAATGCCTT 46046 Query 13787 CAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT--TTGATATCCA 13844 |||| |||||||| || | | || ||| ||||| | || | | || ||| ||||| Sbjct 46047 CAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACAAGGCCTGGTCGTCGTTG--ATCCA 46104 Query 13845 TTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | | ||||| || | |||| || || ||||| || || |||||||| || Sbjct 46105 TCTCAAGGCCCAGTCGGCCTTTTGCTTGATTTGTGGAATTGTCTCAATGGCATTGAACAA 46164 Query 13905 ATGTTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAGCTA-TACATTTC 13961 | || ||| ||| || ||||| | || || ||||| | | ||| | || |||| Sbjct 46165 AAACTCAGACTCCTTAGGGTCCTTGACA--TACGTGTCAATCAAT-AGCGAGTATGTTTC 46221 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT--GACCAT 14019 || || || || || || ||||| || || || ||| | | || ||| |||| Sbjct 46222 CGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGACC-- 46279 Query 14020 TGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCA 14079 || || || | |||| | || ||||||| || || ||||| || || || ||| Sbjct 46280 TGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAGCA 46339 Query 14080 AAAAATGCCAA 14090 ||||| ||||| Sbjct 46340 AAAAACGCCAA 46350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588536776160