Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4 113 4e-20 seq6 93.3 4e-14 >seq4 Length=1632271 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || | |||| |||||| || || |||||||| || ||||| || | | Sbjct 76481 CCACCTCTCAATCTGAGGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 76540 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || |||| |||| ||| ||||| ||| | || | ||| || || || || Sbjct 76541 AAGGTTCTGCCGTCTTCCAACTGCTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 76600 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGG-CTCCGT 18993 | || |||||||| ||| || ||| || | | | | || || | ||| |||| Sbjct 76601 ATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTC-CGAGGACTCCAC 76659 Query 18994 TTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT 19044 ||| | ||||||||||||||| || | |||||||| ||||||||||| || Sbjct 76660 TTCCAAGGTAATGGTTTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 76710 >seq6 Length=1504906 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 || |||| ||| || || |||| |||||| || || ||||||||||||||||| || | | Sbjct 99697 CCACCTCTCAATCTCAAAACCAAGTGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGAC 99638 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| || | || || | || ||||| ||| | || | ||| || ||||| || Sbjct 99637 AAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGG 99578 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || |||||||| ||| || ||| || | | | | || ||| || || | Sbjct 99577 ATACCTTCTTTGTCTTGAATCTTAGATTTGACATTGTCAATGGTGTCGGAAGATTCAACT 99518 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAA 19033 || | |||||| || ||||| || |||||||| || ||| Sbjct 99517 TCCAAGGTAATAGTCTTACCAGTCAAAGTTTTAACGAAA 99479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572577685336