Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq5 260 1e-64
seq10 212 5e-50
>seq5
Length=1624186
Score = 260 bits (288), Expect = 1e-64
Identities = 580/857 (68%), Gaps = 15/857 (2%)
Strand=Plus/Minus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
|||||||| || ||||||||| || ||||| || || |||||| | || || || |||
Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAAC 12979
||||| ||||| |||||||| ||| ||| ||| || ||||| || ||||
Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAGGATACTAAC 610577
Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAA-TCACAGTTCATTCCTATTAA 13038
|| | ||| ||||||||||| | || || ||||||||| | || |||||||||| ||
Sbjct 610576 AACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCA-TTCATTCCTAACAA 610518
Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTC---GATAAC 13095
||||| | ||| || ||| | || ||||||||| |||| ||||| ||| |
Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458
Query 13096 TATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGC 13155
| | || || || || ||| | |||| | ||| ||| | ||| ||
Sbjct 610457 TTTTTCAACAATCTTTTTATCCAAT--TTGTTTTG-CAAATGAGAGTACAATAGACACGC 610401
Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215
||||||| ||||| ||||| || || || || | |||||| ||||| || | ||| ||
Sbjct 610400 AAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGG 610341
Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275
||| || |||| |||||| | |||||| || | ||||||||| || || |||||||||||
Sbjct 610340 CATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCC 610281
Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCA 13335
||| || || ||||| || | | | ||| || || | || | | |||||
Sbjct 610280 TTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCA 610221
Query 13336 CTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAA 13395
| ||||||| ||||| | ||| | || ||| |||| || || || || |
Sbjct 610220 ACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAA-CA 610162
Query 13396 ATAAtttttttCCTTACTG-TCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454
| |||| | ||| ||| ||| |||||||||||||| | |||| ||| | || |
Sbjct 610161 AGAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGG 610102
Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514
|||| || ||||||||| |||||| || ||||| || ||| | ||||| || || |
Sbjct 610101 AATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCA 610042
Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574
| || | |||| ||| ||| ||||| || || || |||||||| ||||||||||
Sbjct 610041 CCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAA 609982
Query 13575 aaGC-AAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTT-TAA--CCAATCT 13630
| || || | || | || || | || || | ||| ||| ||||||
Sbjct 609981 ACGCTAAAACTCTGGAT-ATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATCA 609923
Query 13631 GGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTA 13690
| ||||||| |||||| | ||| || | ||||| ||||| || | ||||| |||
Sbjct 609922 TATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTTA 609863
Query 13691 TACATCATCCATATATC 13707
|||||| ||| || ||
Sbjct 609862 TACATCTGCCAAATCTC 609846
>seq10
Length=744508
Score = 212 bits (234), Expect = 5e-50
Identities = 575/862 (67%), Gaps = 25/862 (3%)
Strand=Plus/Plus
Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919
|||||||| || ||||||||||| |||||||| |||||||| | || ||||| |||
Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688
Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA----TTTTTTACACCCTAATTCTAG 12975
||||||||||| || ||||| | ||| | ||| || || |||| || | |
Sbjct 45689 TCCATAAAATCAAATGGATTGGT--AACGTT-GTAAACCTTGTTGTTACCC-AAGGCGAC 45744
Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035
||||||||||| || || || | ||| || ||| || | |||||||| || |
Sbjct 45745 CAACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAA 45804
Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095
|| || |||| || || || || ||| |||||| || | || |||||| | |
Sbjct 45805 CAAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGAT 45864
Query 13096 TATGT-CTCTT--ATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACA 13152
|| | ||| ||| | ||| | | | || || || ||||| || ||
Sbjct 45865 GATTTTCTCGACAATTTCCGGGTCTGGTTT--GTTCTGCAAG-TGAGAAAACAACAAGCA 45921
Query 13153 TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACC 13212
||||| || |||||| ||||| ||||| | || | ||||| ||||| || | ||
Sbjct 45922 AGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCC 45981
Query 13213 CGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTAT 13272
|||||| | |||| |||||| | ||| || |||| |||||| || ||||| || || ||
Sbjct 45982 CGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAAT 46041
Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-A 13331
|||||||| || ||||| || | ||| |||||| || || | | | || | |
Sbjct 46042 GCCTTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACA-AGGCCTGGTCGTCGTTGA 46100
Query 13332 TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCT--ATTGCGTT 13389
|||| | |||||||| || ||||| || | || | ||| ||| || || ||
Sbjct 46101 TCCATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTT-GTGGA-ATTGTCTCAATGGCATT 46158
Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTA-TACA 13448
|| ||| | | |||||| ||| | ||| || || ||||||| || | ||
Sbjct 46159 GAACAAAAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATA-GCGAGTATG 46217
Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508
|||| ||||| ||||| |||||| || ||||| || || ||| | | ||||||| |
Sbjct 46218 TTTCCGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGA 46277
Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568
|||||||||||| |||| | || | ||||| ||||| || || ||||| ||||
Sbjct 46278 CCTGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAG 46337
Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAAC---TTTAACC 13625
||||||| || | | | ||| || |||||||| | |||| || ||
Sbjct 46338 CAAAAAACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGTTGTTCC 46397
Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685
| || | ||||| || || ||||| | |||||| | ||||| || || || | ||||
Sbjct 46398 AGTCGTGCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCT 46457
Query 13686 TCTTATACATCATCCATATATC 13707
|||| |||||| ||| || ||
Sbjct 46458 TCTTGTACATCTGCCAAATCTC 46479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982168885688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |