Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03- 01] 44 sequences; 16,719,687 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq5 260 1e-64 seq10 212 5e-50 >seq5 Length=1624186 Score = 260 bits (288), Expect = 1e-64 Identities = 580/857 (68%), Gaps = 15/857 (2%) Strand=Plus/Minus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 |||||||| || ||||||||| || ||||| || || |||||| | || || || ||| Sbjct 610696 TTTTGATAGTCTGAAACTCTTTTCTCGAAAAAATTCGTCTTTCCTGCCAAGGAGATGTTT 610637 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAAC 12979 ||||| ||||| |||||||| ||| ||| ||| || ||||| || |||| Sbjct 610636 TCCATGAAATCAAAAGGATTGTTCACGTTATATACTTTATTGTTACCTAAGGATACTAAC 610577 Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAA-TCACAGTTCATTCCTATTAA 13038 || | ||| ||||||||||| | || || ||||||||| | || |||||||||| || Sbjct 610576 AACCGGTCGGCAACAAACTCCACATATTGGTTCATTAAAGTGGCA-TTCATTCCTAACAA 610518 Query 13039 TTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTC---GATAAC 13095 ||||| | ||| || ||| | || ||||||||| |||| ||||| ||| | Sbjct 610517 GGATACAGAAAGAGCGTCATCGAAATATTTCTTTTCTATAGCAACAGCTTCGGTGATGAT 610458 Query 13096 TATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATGC 13155 | | || || || || ||| | |||| | ||| ||| | ||| || Sbjct 610457 TTTTTCAACAATCTTTTTATCCAAT--TTGTTTTG-CAAATGAGAGTACAATAGACACGC 610401 Query 13156 AAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGG 13215 ||||||| ||||| ||||| || || || || | |||||| ||||| || | ||| || Sbjct 610400 AAAATCAGTATGCAAGCCTTCGTCCCTGCTAATCAACTCGTTAGAAAACGTCAAACCTGG 610341 Query 13216 CATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCC 13275 ||| || |||| |||||| | |||||| || | ||||||||| || || ||||||||||| Sbjct 610340 CATGAGACCTCTTTTTTTCAACCAAAAGATTGAAGCAAACGATCCTGAGAAAAATATTCC 610281 Query 13276 TTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCA 13335 ||| || || ||||| || | | | ||| || || | || | | ||||| Sbjct 610280 TTCTACGGCAGCAAAGGCAACAAGACGTTCTGCAAACAAAGCGTTGTCGTCGTTGATCCA 610221 Query 13336 CTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAA 13395 | ||||||| ||||| | ||| | || ||| |||| || || || || | Sbjct 610220 ACGTAAAGCCCAGTCAGCTTTCTCTTTGATGCTCGGTATAGTTTCGATGGCATTGAA-CA 610162 Query 13396 ATAAtttttttCCTTACTG-TCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTG 13454 | |||| | ||| ||| ||| |||||||||||||| | |||| ||| | || | Sbjct 610161 AGAATTCTGCCTCTTTCTGATCTTTGATATAAGTATCTATAAGTAAGGAATAGGTCTCGG 610102 Query 13455 AATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAA 13514 |||| || ||||||||| |||||| || ||||| || ||| | ||||| || || | Sbjct 610101 AATGTATGTTTTCCATCATTATTTGAAATCCATAGAAGCATTTTGCCTCGCTCACTTGCA 610042 Query 13515 CTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaa 13574 | || | |||| ||| ||| ||||| || || || |||||||| |||||||||| Sbjct 610041 CCTCTGTAGAAAAGTTTTGCACTAGATTTTCATTGACAATGCCGTCACTGGCAGCAAAAA 609982 Query 13575 aaGC-AAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTT-TAA--CCAATCT 13630 | || || | || | || || | || || | ||| ||| |||||| Sbjct 609981 ACGCTAAAACTCTGGAT-ATGAAATACCGCTCACCATCGTTAAGCTTGTAATTCCAATCA 609923 Query 13631 GGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTA 13690 | ||||||| |||||| | ||| || | ||||| ||||| || | ||||| ||| Sbjct 609922 TATATATCTTTTCCTAAATCAATCTCTTCGGCAGTCCAGAAAGATGCCTCTGCCTTTTTA 609863 Query 13691 TACATCATCCATATATC 13707 |||||| ||| || || Sbjct 609862 TACATCTGCCAAATCTC 609846 >seq10 Length=744508 Score = 212 bits (234), Expect = 5e-50 Identities = 575/862 (67%), Gaps = 25/862 (3%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 |||||||| || ||||||||||| |||||||| |||||||| | || ||||| ||| Sbjct 45629 TTTTGATAATCAGAGACTCTTTTTTCGAAAAAGTTGGTTTTTCCGGCCAAGGAAATGTTT 45688 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAACAATAGTA----TTTTTTACACCCTAATTCTAG 12975 ||||||||||| || ||||| | ||| | ||| || || |||| || | | Sbjct 45689 TCCATAAAATCAAATGGATTGGT--AACGTT-GTAAACCTTGTTGTTACCC-AAGGCGAC 45744 Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 ||||||||||| || || || | ||| || ||| || | |||||||| || | Sbjct 45745 CAACAATCTGTCGGCGCAGAATTCCACGTATTGACACATCAATTTGCAGTTCATGCCCAA 45804 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095 || || |||| || || || || ||| |||||| || | || |||||| | | Sbjct 45805 CAAGGAAACTGGCAAGGCGTCGGTAAAGTAGTCTTTTTCAATGTTGACAGCTTCGGTGAT 45864 Query 13096 TATGT-CTCTT--ATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACA 13152 || | ||| ||| | ||| | | | || || || ||||| || || Sbjct 45865 GATTTTCTCGACAATTTCCGGGTCTGGTTT--GTTCTGCAAG-TGAGAAAACAACAAGCA 45921 Query 13153 TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACC 13212 ||||| || |||||| ||||| ||||| | || | ||||| ||||| || | || Sbjct 45922 AGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAATTCGTTAGAAAACGTCAAGCC 45981 Query 13213 CGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTAT 13272 |||||| | |||| |||||| | ||| || |||| |||||| || ||||| || || || Sbjct 45982 CGGCATCAAACCTCTTTTTTTCAACCAGAAAATAGAAGCAAAAGAGCCCGAGAAGAAAAT 46041 Query 13273 TCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT-A 13331 |||||||| || ||||| || | ||| |||||| || || | | | || | | Sbjct 46042 GCCTTCAACAGCAGCAAAGGCAACCAATCTTTCAGCAAACA-AGGCCTGGTCGTCGTTGA 46100 Query 13332 TCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCT--ATTGCGTT 13389 |||| | |||||||| || ||||| || | || | ||| ||| || || || Sbjct 46101 TCCATCTCAAGGCCCAGTCGGCCTTTTGCTTGATTT-GTGGA-ATTGTCTCAATGGCATT 46158 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTA-TACA 13448 || ||| | | |||||| ||| | ||| || || ||||||| || | || Sbjct 46159 GAACAAAAACTCAGACTCCTTAGGGTCCTTGACATACGTGTCAATCAATA-GCGAGTATG 46217 Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508 |||| ||||| ||||| |||||| || ||||| || || ||| | | ||||||| | Sbjct 46218 TTTCCGAATGGATATTCTCCATCATGATCTGGAACCCGTAGAAAAACTTGGCCTCTGGGA 46277 Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 |||||||||||| |||| | || | ||||| ||||| || || ||||| |||| Sbjct 46278 CCTGAACTTCGGCAGAAAAGTTCTCCACCAAGTTCTCGTTGACAATTCCGTCCGACGCAG 46337 Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAAC---TTTAACC 13625 ||||||| || | | | ||| || |||||||| | |||| || || Sbjct 46338 CAAAAAACGCCAAAACCCGAGAAATGAAAAACCGCTCGTTTTCCGTCAACCGGTTGTTCC 46397 Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685 | || | ||||| || || ||||| | |||||| | ||||| || || || | |||| Sbjct 46398 AGTCGTGCAAATCCTTGGACAAATCAATCTCCTCGGCTGTCCAGAACGACGCTTCGGCCT 46457 Query 13686 TCTTATACATCATCCATATATC 13707 |||| |||||| ||| || || Sbjct 46458 TCTTGTACATCTGCCAAATCTC 46479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982168885688