Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomycopsis_20malanga_20[genbank_20GCA_5F001599215.1_202016-03-
01] 44 sequences; 16,719,687 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq5 199 9e-46
seq10 158 3e-33
seq6 152 1e-31
seq1 143 6e-29
>seq5
Length=1624186
Score = 199 bits (220), Expect = 9e-46
Identities = 578/875 (66%), Gaps = 35/875 (4%)
Strand=Plus/Plus
Query 268701 GATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTTG 268760
|||||||| | ||||| || || | ||| || ||| |||||| ||| |||| | |
Sbjct 609817 GATTTGTGCTTTTTCCTATCAAGTACCATGAGATTTGGCAGATGTATAAAAAGGCAGAGG 609876
Query 268761 CTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAATT 268820
| ||||| ||||||| ||||| | ||| | | || || |||||||| |
Sbjct 609877 CATCTTTCTGGACTGCCGAAGAGATTGATTTAGGAAAAGATATATATGATTGGAA----T 609932
Query 268821 TAAAACCAGAAGAAAGAAGATTTATATCTTATATTC-------TTGCGTTTTTTGCAGTT 268873
|| || | || | | || ||| | |||| | | ||||||||||| |
Sbjct 609933 TACAAGCTTAACGATGGTGAGCGGTATTTCATATCCAGAGTTTTAGCGTTTTTTGCTGCC 609992
Query 268874 AGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCT 268933
||||| || || || || ||||||||||| | || || | | |||||| || |
Sbjct 609993 AGTGACGGCATTGTCAATGAAAATCTAGTGCAAAACTTTTCTACAGAGGTGCAAGTGAGC 610052
Query 268934 GAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTAC 268993
|| || | ||| || || ||||| || ||| || ||||| || ||||| |||| ||
Sbjct 610053 GAGGCAAAATGCTTCTATGGATTTCAAATAATGATGGAAAACATACATTCCGAGACCTAT 610112
Query 268994 AGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC--TT 269051
|| | |||||||||||||| | ||| | || || | || || | ||| |
Sbjct 610113 TCCTTACTTATAGATACTTATATCAAAGATCAGAAAGAGGC-AGAATTCT-TGTTCAATG 610170
Query 269052 CTATGAGAACTATGGACTGTG--TGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAAA 269109
| || |||||| || | | | | | | ||| |||| |||||| | ||||| ||
Sbjct 610171 CCATCGAAACTAT--ACCGAGCATCAAAGAGAAAGCTGACTGGGCTTTACGTTGGATCAA 610228
Query 269110 CGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATT 269166
||| | ||| || | |||| | | ||||| ||||| || |||||||| |||||
Sbjct 610229 CGACGACAACGCTTTGTTTGCAGAACGTCTTGTTGCCTTTGCTGCCGTAGAAGGAATATT 610288
Query 269167 CTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATT 269226
|| || || || ||||| | |||||||||||||| |||||||| || |||||||| ||
Sbjct 610289 TTTCTCAGGATCGTTTGCTTCAATCTTTTGGTTGAAAAAAAGAGGTCTCATGCCAGGTTT 610348
Query 269227 AACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTT 269286
|| || |||||||| ||||| |||||||||||||| || || || || || ||| |
Sbjct 610349 GACGTTTTCTAACGAGTTGATTAGCAGGGACGAAGGCTTGCATACTGATTTTGCGTGTCT 610408
Query 269287 ATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGA 269346
|| | |||| | || | | ||||| | || | | || | |||| ||
Sbjct 610409 AT--TGTACT-CTCATTTGCAAAACAAATTGGATAAAAAGATTGTTGAAAAAATCATCAC 610465
Query 269347 TTCAGCTGTTTCTGTAGAAACAGA---ATTTCTAACGGAAGCTCTATC--TATCGATCTT 269401
||||||| || |||||| ||| ||||| | || ||||| || |||| | ||
Sbjct 610466 CGAAGCTGTTGCTATAGAAA-AGAAATATTTCGA--TGACGCTCTTTCTGTATCCTTGTT 610522
Query 269402 ATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTG 269461
| || |||||| || | |||| ||||| | |||| || | || | ||| |
Sbjct 610523 A--GGAATGAATGCCACTTTAATGAACCAATATGTGGAGTTTGTTGCCGACCGGTTGTTA 610580
Query 269462 GTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAAT 269521
|| || ||||| | |||| ||||||||| | ||||| ||| ||| ||||| ||
Sbjct 610581 GTATCCTTAGGTAACAATAAAGTATATAACGTGAACAATCCTTTTGATTTCATGGAAAAC 610640
Query 269522 ATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556
|| || || | ||| ||| | ||||| ||||||||
Sbjct 610641 ATCTCCTTGGCAGGAAAGACGAATTTTTTCGAGAA 610675
>seq10
Length=744508
Score = 158 bits (174), Expect = 3e-33
Identities = 169/221 (76%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 269079 aaaaaTCTGAATGGGCTCTGAAATGGATAAACGAT-AGCGCGCCTTAC--GGAGAAAGGT 269135
|||| | || ||||| ||| |||||| ||||| | | ||||| | ||||| |
Sbjct 46127 AAAAGGCCGACTGGGCCTTGAGATGGATCAACGACGACCAGGCCTTGTTTGCTGAAAGAT 46068
Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195
| ||||| ||||| ||||| ||||| || ||||| ||||| |||||||| |||| || |
Sbjct 46067 TGGTTGCCTTTGCTGCTGTTGAAGGCATTTTCTTCTCGGGCTCTTTTGCTTCTATTTTCT 46008
Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255
||||||| |||||||| | ||||| || || || || |||||||||||||| |||| |
Sbjct 46007 GGTTGAAAAAAAGAGGTTTGATGCCGGGCTTGACGTTTTCTAACGAATTGATCTGCAGAG 45948
Query 269256 ACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACT 269296
|||||||||| ||| |||||| ||||| || || ||| ||
Sbjct 45947 ACGAAGGTTTGCACACCGACTTTGCTTGCTTGTTGTTTTCT 45907
>seq6
Length=1504906
Score = 152 bits (168), Expect = 1e-31
Identities = 150/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
|| || || ||||| || |||||||| |||||||| | ||||| || ||||||| |||
Sbjct 99673 TGCAAGGTGGATTCCTTTTGAATATTGTAGTCAGACAAGGTTCTGCCATCTTCTAATTGC 99614
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| |||||||| || | || ||||||||||| || || |||||||| || ||||||||
Sbjct 99613 TTACCAGCAAAGATCAATCTTTGTTGATCAGGTGGGATACCTTCTTTGTCTTGAATCTTA 99554
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
| ||| ||||| || | ||| ||| || ||| || || | |||||||||||||||||
Sbjct 99553 GATTTGACATTGTCAATGGTGTCGGAAGATTCAACTTCCAAGGTAATAGTCTTACCAGTC 99494
Query 104537 AGTGTTTTTACAAA 104550
| ||||| || ||
Sbjct 99493 AAAGTTTTAACGAA 99480
>seq1
Length=3127730
Score = 143 bits (158), Expect = 6e-29
Identities = 174/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | ||||| || | || || || || || || ||||| || ||||||
Sbjct 1884766 ATACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCA 1884707
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||| ||||||| |||||| ||||||||||| | || |||||||| ||
Sbjct 1884706 GACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 1884647
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || || || || | || || | |||
Sbjct 1884646 GGAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCA 1884587
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGT 104566
|| || | || || ||||||||||| | || || ||||| || |||||| |||||
Sbjct 1884586 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACAAAGATTTGCATTATGTGT 1884530
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| | ||||| || | || || || ||||| || ||||| || ||||||||
Sbjct 1885219 CCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 1885160
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||||| ||||||| |||||| ||||||||||| | || |||||||| || ||
Sbjct 1885159 AAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGTGGA 1885100
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || |||||||||| || || || || | || || | ||| ||
Sbjct 1885099 ATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCAACT 1885040
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| | || || ||||||||||| | || || || || || |||||
Sbjct 1885039 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884993
Score = 131 bits (144), Expect = 4e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| | ||||| || | || || || || || || ||||| || ||||||
Sbjct 1884994 ATACCACCTCTCAATCTAAGGACCAAGTGCAAAGTGGACTCCTTTTGAATGTTGTAGTCA 1884935
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | |||||||| ||||||| |||||| ||||||||||| | || |||||||| ||
Sbjct 1884934 GACAAGGTTCTACCATCTTCTAATTGTTTACCAGCAAAAATCAATCTTTGTTGATCTGGT 1884875
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || |||||||||| || || || || | || || | |||
Sbjct 1884874 GGAATACCTTCCTTGTCTTGAATCTTTGACTTGACGTTGTCAATAGTGTCAGAGGATTCA 1884815
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || | || || ||||||||||| | || || || || || |||||
Sbjct 1884814 ACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTAACGAAGATTTGCAT 1884765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397750899152
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